Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1173 |
Symbol | |
ID | 6462470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1227638 |
End bp | 1228621 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727421 |
Product | Transketolase central region |
Protein accession | YP_002018065 |
Protein GI | 194336271 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3958] Transketolase, C-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000393635 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA ATAACATCGG GGTTCCGGCT TCGCCATATG TTTCGCGGGG AAACAAAGCT ACCCGTACCG GGTTTGGCGA AGCTTTGCTT GAAATAGGCA GGGAGGATAG TTCTGTTGTC GCTCTGTGCG CCGATTTGAC GGGCTCCCTG AATATGAATT TATTTCGCGA TGCTTTTCCC GACCGTTTTA TCCAGACAGG GATCGCTGAG GCAAACATGA TCTCCATGGC TGCCGGTCTT GCGACAACAG GCAAAATACC GATTGCAGCA ACGTTTGCCG TCTTTGCTAC TGGCAGGGTT TACGATCAGA TACGCCAGTC GGTCTGTTAT TCAAATCATA ATGTAAAGAT CTGCGCTTCA CATGCAGGGC TGACACTGGG TGAAGATGGA GCTACCCACC AGATTCTTGA GGATATTGGC CTTATGCGTG GTCTGCCAAG AATGACGGTA GTTGTGCCCG CCGATTACAG TGAAACCATT CGTGCGACCA GGGCCATTGT GAAGCATCAG GGGCCAGTCT ACCTTCGTTT CGGAAGGCCG AACATTCCTG ATTTTTCGCT TGACGAGGAT GGCTTTGAAA TCGGCAAGTC GATCGAGCTC CATCCAGGAA AAGATGTTAC CGTCATTGCC TGTGGTATCA TGGTCTGGAA AGCTCTTGAA GCTGCGCGTA TACTTGAAAA AGAGGGGGTT GGCGTCAGGG TGATCAACAT GCACACGATC AAGCCAATCG ATACGCTTGC TATCGTTCGC GCGGCCAATG ATACCGGCGC TCTTGTTACG GCTGAAGAGC ACCAGACCTT TAACGGTCTT GGTGATGCAG TGGCCCATGT TTGTGCTCTC AATATTCCGG TACCGATTGA GATGGTCGGA GTTGAAGATC AGTTTGGCGA GTCAGGAAAA GCTGATGAGC TTCTGGAAAA ATACAGGCTG ACAACCGGAG ACATTCTTGA AAAAATTTAC ATCGCTCTGC GCAGAAAGAG TTGA
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Protein sequence | MEENNIGVPA SPYVSRGNKA TRTGFGEALL EIGREDSSVV ALCADLTGSL NMNLFRDAFP DRFIQTGIAE ANMISMAAGL ATTGKIPIAA TFAVFATGRV YDQIRQSVCY SNHNVKICAS HAGLTLGEDG ATHQILEDIG LMRGLPRMTV VVPADYSETI RATRAIVKHQ GPVYLRFGRP NIPDFSLDED GFEIGKSIEL HPGKDVTVIA CGIMVWKALE AARILEKEGV GVRVINMHTI KPIDTLAIVR AANDTGALVT AEEHQTFNGL GDAVAHVCAL NIPVPIEMVG VEDQFGESGK ADELLEKYRL TTGDILEKIY IALRRKS
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