Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1167 |
Symbol | |
ID | 6463525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1218543 |
End bp | 1220681 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642727415 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_002018059 |
Protein GI | 194336265 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.169366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCGG ACTTTTCAGA GATCGATATT TTCTCTTCCG CTCCAACAGC CAATAAAACT GGCACAGAAG CTCAGCAGAC AGGCTGGACA ACTGCGGAAG GAATCGACAT CAAATCCCTA TACCGTGAAT CCGATATTGG ACAAGCTGAG CAACTGAACT TTGCTCCCGG TTTTGCTCCC TACATAGGTG GCCCCTACAC CACCATGTAC ACCACACAAC CCTGGACGAT CAGGCAGTAT GCAGGATTTT CAACCGCCGA GGAGTCGAAT CGCTTTTACC GCCAGAACCT TGCCGCAGGT CAGAAAGGGC TCTCCGTCGC TTTCGACCTT CCAACACACC GTGGTTACGA TTCTGACCAT GAACGGGTCA TTGGCGACGT CGGGAAAGCC GGTGTAGCTG TAGACTCGGT TGAAGATATG AAAATCCTCT TTGACCAGAT TCCGCTTGGC GACATCTCAG TCTCTATGAC CATGAACGGA GCAGTGCTGC CCATCATGGC CTTTTATATC GTTGCGGCAG AAGAGCAGGG AGTGCCAACC GAAAAGCTCA GCGGTACCAT CCAGAACGAT ATTCTCAAAG AGTTCATGGT ACGCAACACT TATATCTATC CGCCAGAACC CTCCATGCGG ATTATTGCCG ACATTTTCCG CTACACCAGC GAAAAAATGC CGAAATTCAA CTCGATCAGC ATCTCAGGCT ACCACATGCA GGAAGCGGGA GCAACAGCCG ACCTGGAGCT GGCCTTCACT CTTGCCGACG GCCTCGAATA TATTCGTACC GGCCTGAAAA CAGGTCTCGA TATTGATGCC TTTGCGCCAC GCCTCTCTTT CTTCTGGGCG ACCGGAATGA ACTTCTTTAT GGAGATAGCC AAATTAAGGG CCGCAAGAAT GCTCTGGGCA AAAATCGTCG GGCAGTTCAA TCCGAAAAAT CCAAAATCAC TCATGCTCCG TTCGCACTGC CAGACCTCTG GTTGGAGTCT GACCGAGCAG GATCCCTTCA ATAACATCAC CCGCACCTGC CTGGAGGCTC TGGCAGCAAC GCTCGGCCAC ACCCAGTCAC TGCACACCAA TGCGCTTGAT GAAGCCATCG CACTGCCATC ACCCTTTTCA GCCCGAATTG CCCGCAATAC CCAGCTCTAT CTGCAGGAAG AGAGCGATAT CACCAGAAGC ATCGACCCCT GGGCTGGCTC CTCGTATGTT GAATACCTGA CGGCAGAGCT CGCGGCGAAA GCATGGAAAA TCATCAGCGA CATCGAAGAG GCGGGAGGAA TGGTCAAAGC GATCGAACAA GGACTCCCAA AACTGCAGAT TGAAGAGGCT GCAACCCGTA AACAGGCCCG CATCGACAGC GGCAAGGAGA TCATTGTCGG CGTCAACGGC TACAAAACCA CAAGCAAAAC TGAGATTGAG CTGCTCGAAG TCGACAACAC CCTGGTACTC GATCAACAGC TCCGGCGACT GACATCCATC AAGGCTGAAC GCGACAGCGA TGCTTGTGCC CTTGCACTCA AGGCAATTGA GGAGAGCGCA GCATCCGGAG AGGGTAATCT GCTTGAACTG GCCGTTGATG CCGCAAGAAA AAGAGCTACA TTGGGAGAAA TCTCATTCGC CTGCGAAAAA ACTTTTGGAA GATATCGCGC CATAACCCGA CTTAACAGCA GTGTCTATAT GTCGCAGATG CAGGACAATA CACTCTTTAA AGAGGCGCAG CAACTCGCCG ATACCTTTGC GTCGCTTGAC GGTCGCCGTC CGAGAATCAT GGTTTCAAAA GTTGGACAGG ATGGCCACGA TCGTGGAGCA AAGGTCATTG CCGCAGGCTT TGCCGATGTC GGTTTTGACG TCGATATCAG CCCTTTATTC CAGACACCTG AAGAGGTGGT GCAGCAGGCA CTCGACAACG ATGTGCACCT GATCGGCATA TCGAGCCTTG CCGCCGGCCA CAAGACCTTG ATCCCGAAAA TCATCGAAGA GCTAAAAGCC CACAATCGGG AGGATATCCT TGTCATTGCA GGAGGCATCA TTCCCGAAAA AGATCACGCT TTCCTCTATG AAAAAGGGGT GGCAGGCATC TTCGGACCGG GAACCGTCAT TGCCGAAGCG GCCATTACGA TTTTGAAAAA ATTGATCGCA CAGGTGTAA
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Protein sequence | MRPDFSEIDI FSSAPTANKT GTEAQQTGWT TAEGIDIKSL YRESDIGQAE QLNFAPGFAP YIGGPYTTMY TTQPWTIRQY AGFSTAEESN RFYRQNLAAG QKGLSVAFDL PTHRGYDSDH ERVIGDVGKA GVAVDSVEDM KILFDQIPLG DISVSMTMNG AVLPIMAFYI VAAEEQGVPT EKLSGTIQND ILKEFMVRNT YIYPPEPSMR IIADIFRYTS EKMPKFNSIS ISGYHMQEAG ATADLELAFT LADGLEYIRT GLKTGLDIDA FAPRLSFFWA TGMNFFMEIA KLRAARMLWA KIVGQFNPKN PKSLMLRSHC QTSGWSLTEQ DPFNNITRTC LEALAATLGH TQSLHTNALD EAIALPSPFS ARIARNTQLY LQEESDITRS IDPWAGSSYV EYLTAELAAK AWKIISDIEE AGGMVKAIEQ GLPKLQIEEA ATRKQARIDS GKEIIVGVNG YKTTSKTEIE LLEVDNTLVL DQQLRRLTSI KAERDSDACA LALKAIEESA ASGEGNLLEL AVDAARKRAT LGEISFACEK TFGRYRAITR LNSSVYMSQM QDNTLFKEAQ QLADTFASLD GRRPRIMVSK VGQDGHDRGA KVIAAGFADV GFDVDISPLF QTPEEVVQQA LDNDVHLIGI SSLAAGHKTL IPKIIEELKA HNREDILVIA GGIIPEKDHA FLYEKGVAGI FGPGTVIAEA AITILKKLIA QV
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