Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1153 |
Symbol | |
ID | 6462257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1201859 |
End bp | 1202860 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727401 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_002018045 |
Protein GI | 194336251 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTTA TCACTGGCGG CGCAGGATTT ATTGGAAGCG CCATGCTTTG GGAGCTCAAC AGAAGAGGTG AAGAGAATGT CATCATTGTC GATGATCTTG GGTTCACAAC CACAGAAAAA TGGCGCAATC TTTCCGGACT TCATTTTGCC GATTTTATTC CCATAGAGCT TTTTCCCGGC CTGCTCGAAA GAAATGCACT CGAAGGGATC TCGGCTATCA TCCATATGGG CGCGAATAGT TCGACAACAG AAACCGATGC CGACCATCTT CTTGCCAACA ATTTCGGCTA CTCAAAAAAA ATTGCTTCGT TCTGCATGCA GCATGAAGTA CGACTTATCT ATGCATCAAG CGCAGCAACC TATGGTGACG GATCGAACGG ATACAGTGAT GCCATTGAAG GGATGGCTGC ACTCCGACCA CTGAATATGT ATGGATACTC CAAACAGCTC TTTGACCACT GGGCAGTGAA GCACCATATC CTCAATCATG CCGCTGGTCT GAAATTCTTC AATGTCTACG GCCCAAACGA ATATCACAAG GGAGATATGA GCAGTGTCGT CTATAAGGCG TTTCATCAGA TAGGCGAACA TGGGGTATTG AATCTCTTTC AATCGCACAG GCCAGACTAC CGTGATGGTG AACAATCAAG GGATTTCGTC TACATCAAAG ATTGTACCCG AATTATGGCA TGGATGCTTG AAACCCCTTC AGCAACCGGA CTCTTCAATA TCGGCTGCGG AACACCAAGA AGCTTCAATG ACCTTGCGGC TGCAACGTTC TCCGCGCTTG ATCGTCAAAT CCTCATCAAC TACACACCCA TGCCGGAGAG CCTTCGTGAT AAATATCAGT ACTACACCTG CGCGGATATC ACTCGGCTGC GAGAGGCAGG ATTCAGCGAA ACGCTCACCT CAATCGAGGA TGGTATTAGA GAATATGTGC AACACTACCT CGCATCTGCC AATCCATATT TTGACTACAC AAAGCCCACT TCCAATGCAT AA
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Protein sequence | MIVITGGAGF IGSAMLWELN RRGEENVIIV DDLGFTTTEK WRNLSGLHFA DFIPIELFPG LLERNALEGI SAIIHMGANS STTETDADHL LANNFGYSKK IASFCMQHEV RLIYASSAAT YGDGSNGYSD AIEGMAALRP LNMYGYSKQL FDHWAVKHHI LNHAAGLKFF NVYGPNEYHK GDMSSVVYKA FHQIGEHGVL NLFQSHRPDY RDGEQSRDFV YIKDCTRIMA WMLETPSATG LFNIGCGTPR SFNDLAAATF SALDRQILIN YTPMPESLRD KYQYYTCADI TRLREAGFSE TLTSIEDGIR EYVQHYLASA NPYFDYTKPT SNA
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