Gene Ppha_1147 details

Gene Information

• Locus tag: Ppha_1147
• ID: 6463116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1197901
• End bp: 1198527
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642727395
• Product: Lysine exporter protein (LYSE/YGGA)
• Protein accession: YP_002018039
• Protein GI: 194336245
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGATA GTAACGTGCT GCTTGCGTTT TTTACGACGT CAGTAATTCT TGCGCTCTCT 
CCCGGCCCCG ACAACCTTTT TGTTTTGGCG CAGTCGGCCC AGAATGGGCG TAGAGCCGGG 
CTTTTTGTAA CACTCGGTCT TGCAACAGGG CTGATTGGAC ATACGGTTGC TGTTGCTTTT 
GGTCTTGCGG CCATCGTGCA TTCGTCGGCG CTCGCATTCA CCATTCTGAA AGGTGTGGGT 
GCGGCATATC TGCTTTATCT TGCATGGCAG GCACTCAGGG CAGCGGCGTT AACCGGGCAG 
GGGGAGCCGG TTCAGGCTTA CTCAATGGGG GCGCTCTATC GCCGGGGGAT TGTCATGAAC 
TTGAGCAATC CCAAGGTATC GCTCTTTTTT ATGGCGTTTT TGCCACAGTT TGCCGATCCA 
CGTTATGGCT CCATGAGGGG GCAGTTTTTC CAGCTTGGAG CTGTTTTTAT TATGGCAACT 
ATCCTTGTTT TCGGTGTTAT CAGCTTTTTT GCCGGTGGGT TCGGCGACAA GTTTCGCAAT 
GCAGTTTCTG CTCAAAAAAC AGTTAACAGG GTAGCCGCTT TCGTATTTAT TGCTCTTGCC 
ATTAAGCTGG CAGTTTCGGA ACGATAA 

 

Protein sequence

MIDSNVLLAF FTTSVILALS PGPDNLFVLA QSAQNGRRAG LFVTLGLATG LIGHTVAVAF 
GLAAIVHSSA LAFTILKGVG AAYLLYLAWQ ALRAAALTGQ GEPVQAYSMG ALYRRGIVMN 
LSNPKVSLFF MAFLPQFADP RYGSMRGQFF QLGAVFIMAT ILVFGVISFF AGGFGDKFRN 
AVSAQKTVNR VAAFVFIALA IKLAVSER