Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1145 |
Symbol | |
ID | 6463219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1196164 |
End bp | 1197165 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642727393 |
Product | bacteriochlorophyll/chlorophyll a synthase |
Protein accession | YP_002018037 |
Protein GI | 194336243 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01476] bacteriochlorophyll/chlorophyll synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGATT TTCGTGCCAA AAAGAGTTCA GAGCCTCAGT TGCCTGATCG GAGCGAGTTC AAAACGCCCT TGAGTGTCCG TAAACTGGTT GATGCCCGGC CAATGCCCGC TGAGAACATC TCAAAACTTG CACTGATCAT TCGATTCCTT AAACCGGTCA CATGGATTCC TGTCATGTGG AGCTTTCTCT GCGGAGCCGT AGCAAGCGGA GCCTTTGGAT GGAAGGAGGT GATCAGCATA AAGTTTCTCC TCGCCATGCT GCTGACCGGT CCTCTGGCAA GTGGAACCTG TCAGATGCTG AATGACTATT TTGACCGTGA TCTTGATGAA ATCAACGAAC CAAACCGCCC TATACCCGGC GGCGCCATCT CACTCAGAAA TGCCACCATC CTGATTGCCC TATGGTCGGT CTTTTCGGTT ATCACAGGTT ATCTGATCCA TCCGCTCATC GGTTTTTACG TCGTCATCGG CATTATTAAT GCGCATCTCT ACAGCGCAAA CCCCATCAAA CTCAAAAAAA GGCTCTGGGC AGGCAATATC ATTGTTGCCG TCTCCTACCT TATCATACCC TGGATAGCCG GAGAGATCGC CTACAACCCC TCCTTTACCC TCTCATCGCT TCAGCCATCG TTGATCGTTG CCGGACTTTT CACCCTCTCA AGCACCGGCA CCATGACCAT CAACGACTTC AAATCAATTG AGGGTGACAG GATGGTAGGC ATCAGAACGC TCCCCGTTGT CTTCGGAGAA ACCCATGCTG CACTGATTGC CGCAGTGCTC ATCAATGCCG GCCAGCTCCT TGCATCAGGC TATATGTTCC TGATTGGTCA AACTACCTGC GGAATCATTG TCGGCGCACT CGTCGTCCCG CAATTCTACC TGCAGTTTGC TCTCGTAAAA TCACCAGCAA CAATGGATGT ACGCTATAAT GCCATTGCGC AGAACTTTCT GGTCGCCGGT ATGCTGGTCT GCGCCTTTGC CATCAGAGCT GCAAGACCAT GA
|
Protein sequence | MSDFRAKKSS EPQLPDRSEF KTPLSVRKLV DARPMPAENI SKLALIIRFL KPVTWIPVMW SFLCGAVASG AFGWKEVISI KFLLAMLLTG PLASGTCQML NDYFDRDLDE INEPNRPIPG GAISLRNATI LIALWSVFSV ITGYLIHPLI GFYVVIGIIN AHLYSANPIK LKKRLWAGNI IVAVSYLIIP WIAGEIAYNP SFTLSSLQPS LIVAGLFTLS STGTMTINDF KSIEGDRMVG IRTLPVVFGE THAALIAAVL INAGQLLASG YMFLIGQTTC GIIVGALVVP QFYLQFALVK SPATMDVRYN AIAQNFLVAG MLVCAFAIRA ARP
|
| |