Gene Ppha_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1144 
Symbol 
ID6463237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1195538 
End bp1196167 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content47% 
IMG OID642727392 
Productglycosyl transferase family 2 
Protein accessionYP_002018036 
Protein GI194336242 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA TCTCCAGACC CGACATTTCG ATTATCATGC CCACCTTCAA CCGGGCAAAT 
CATCTTGAAT GTGCTATACA CAGCGTTCTT GCCCAATCCT TCAGTAACTG GGAACTGATT
ATTGTCGATG ACGGCAGCAA TGACAACACC TTCGAAAAGC TTGACCCATT CATTCTCAAA
TTTCCCAATA TCCGGTACAT GAAACAGAGC AACCGGAAAG CTGCACTCGC TCGAAACACA
GGAATTCAGG CCTCTTTCGG CCGCTACATC ACCTTTCTTG ACAGTGACGA CCACTATCTG
AAAAACCATC TCGAAACGCG GATCACCCTC ATCGAAGAGA TGCAGGATGT TTCCATGCTC
TCGGGAGGAT TTCTCTGCGA TGAAACCATC ACGGTCAAAG ACTGTTATCA TCCTGACTCT
CTTGTCGGTA TCAGGGAGTG CATCCTTTGT GGTACCCTCT TCGGAAAAAG AGAGCTCTTT
TTTGCGCTCG ACGGATTCAG CGACATGGAG TACGCTGAAG ATACCGATCT ATGGGAAAGA
GCTTCCAGGC TCTTTTCTTT AAAAAAGATA GAAGAGCCGA AAACCTATGT CTACCAACGA
GCCAGCGACA GTATCACCCT TAACCGTTAA
 
Protein sequence
MKGISRPDIS IIMPTFNRAN HLECAIHSVL AQSFSNWELI IVDDGSNDNT FEKLDPFILK 
FPNIRYMKQS NRKAALARNT GIQASFGRYI TFLDSDDHYL KNHLETRITL IEEMQDVSML
SGGFLCDETI TVKDCYHPDS LVGIRECILC GTLFGKRELF FALDGFSDME YAEDTDLWER
ASRLFSLKKI EEPKTYVYQR ASDSITLNR