| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1109 |
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| Symbol | |
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| ID | 6463592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1141219 |
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| End bp | 1142004 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727355 |
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| Product | Beta-lactamase |
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| Protein accession | YP_002018005 |
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| Protein GI | 194336211 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2602] Beta-lactamase class D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00564969 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTAC TGATATTATT GCTGCTTTTC TTTGGCGTGC CGACGCGTTC GGGCGCGCAG
GAGATCGACA GAACGCTTTT CGGCGCCTTG GATACGGCGC TGGTGATCGT TAACCGCTCC
TCCGGTGCTG TGACCGATGT GAATCCGGCA CTCAGCGCTC GGCGAATGTC TCCCTGCTCA
ACATTCAAGA TTTATAATAC TCTTATCGGC TTGCAGCTCG GCCTGATCAA GGGAGCCGAT
GATCCCTGGT ATACATGGGA TGGTGTGCAT CGGGATATCG ATGCATGGAA TGGCGATTTA
ACTCTTCGTG AGGCGTTCCG GGTTTCGGCA GTGCCTGCTT TTCAGGCGCT GGCAAGAGCT
ATCGGGCCTG CACGGATGAA GACATATATC GAACGGATCG GCTATGGAAA CGGGGATATC
TCTGCGGGGA TCGATACTTT CTGGCTTCCC CGGAAAGGAA AAACCGGAAT GCTCATCAGC
GCCAAAGAGC AGGTCGCGTT ATTAAACAAA CTGCTTGACG GCAGGCTGCC GTTTTCCGGA
AAGCATGTGA AAACACTTCG TGAAGTCATG CTGGTAGCAG AAACTCCAAA AGGGAAACTC
TATGGCAAGA CCGGATCAGG CAAGAGTGCT GACGGCAAAG AAGAGCTCGG ATGGTTTGTC
GGCTTTCTCG AAAGTGGGGG AGTCGAGTAC GTGTTTGCCT GCAACATCAC CGGCGGAGAG
CATCCTACAG GAAAAGCCGC CCGCGCTATC GTTGAAAACG TTTTCAGGTC TCAGAATCTT
CTGTAG
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| Protein sequence | MKLLILLLLF FGVPTRSGAQ EIDRTLFGAL DTALVIVNRS SGAVTDVNPA LSARRMSPCS
TFKIYNTLIG LQLGLIKGAD DPWYTWDGVH RDIDAWNGDL TLREAFRVSA VPAFQALARA
IGPARMKTYI ERIGYGNGDI SAGIDTFWLP RKGKTGMLIS AKEQVALLNK LLDGRLPFSG
KHVKTLREVM LVAETPKGKL YGKTGSGKSA DGKEELGWFV GFLESGGVEY VFACNITGGE
HPTGKAARAI VENVFRSQNL L
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