Gene Ppha_1056 details

Gene Information

• Locus tag: Ppha_1056
• ID: 6461012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1086946
• End bp: 1087572
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642727304
• Product: vir region protein-like protein
• Protein accession: YP_002017954
• Protein GI: 194336160

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACAGGA TAAAATCAGG CATCGCCCGG CTGAGCATGG TGTCAATGTT GGTCGGATTA 
ACTATGGTTA TTATGTCTTC GGCTCTTTCG TTTGCCGCGA AGATTGGTGA TAGTTACAGT 
GGGGGTATTG TCTTTTTTGT TGATAGTACC GGGCAGCATG GTTTGATTGC TGCCAGGGAG 
GATATAGATC TCTCCTATAT CGATGCATAT GGTGCAGGGG AGGTTGTTGG GGCATATCGC 
TGGAGTACCG GCCAATATAG AGATGCGGTT CGTCCTGATT ATGCAGAGAA GATGCTATCG 
AATACAAGCC CGGCCATTGG TGAAGGAGCA GAAAATACGA GAAAGATTTT GGCAAAATAT 
CCTGTAGCAC TTTTTCCGCA AAGCGCTTCA GCCGTTGCGT CAATGTATCG CGGTGGTGGT 
TACAGCGACT GGTTTTTACC GAGCAAGGAG GAGCTGAACC AGCTTTATCT CAACAGAGGA 
GCTGTTGAGG GTCTTGTACC TAATTTCTAC TGGAGTTCAA CGGAGGATAG TGCAGACCAT 
GCATGGTTTC AGTGTTTCTC CAATGGCAAG CAGTTTGCCA CCAATAAAAC CCATGTCAAT 
CTTGTTCGGC CTGTCCGGGC TTTTTGA 

 

Protein sequence

MNRIKSGIAR LSMVSMLVGL TMVIMSSALS FAAKIGDSYS GGIVFFVDST GQHGLIAARE 
DIDLSYIDAY GAGEVVGAYR WSTGQYRDAV RPDYAEKMLS NTSPAIGEGA ENTRKILAKY 
PVALFPQSAS AVASMYRGGG YSDWFLPSKE ELNQLYLNRG AVEGLVPNFY WSSTEDSADH 
AWFQCFSNGK QFATNKTHVN LVRPVRAF