| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1044 |
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| Symbol | |
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| ID | 6462628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1076911 |
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| End bp | 1077507 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727293 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_002017943 |
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| Protein GI | 194336149 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.542403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA TTCTTCTTGA CATAGGCAGT GTTTTGGTGT CGGTGGATTT TATGCGTTTC
TGTCGGGATG TGGCACTGGA TTCGGTTTCA GGTGCGCAGG AGATCTACCG GAAATATTGT
ACTGGCGAGC TGAAAGCTAA ACTTGAAACC GGCTTTATCG CGCCGTTCGA ATACCTTGAC
GTGATTGCCA TCGACCCTCA TTCCAGAACG ATGCCGCTGC ACGAGCTGAA ACTGCGCTGG
CAGGATATTT TTGAACCGCT CGAGGGCGCT GTTGGGGCGG TCAAACGGCT CAAAGAGCAC
CATTCCATCT GGATCATGAG TGATACTGAC CCGCTCCATT TTACCTTTCT GCTCAATAAT
TATCCTGTAC TGCGGGATGC GGATCGCTAC TATCTCTCCT TTGAACAGGG GAAGATGAAA
AACAGTGTCG AAGCATTTAA GCGTGTGCTC GAAAATTCAG GGTGCGGGGC TGATGAATTT
GTTTTGATTG ATGACAAGGA GGAAAACTGT GCATCGGCTT CAGAAGCCGG TATCAGGAGT
ATACTCTTTC ATAACTGGCG TGATACCCTT GCGTTGCTAT ATGAAAATAA GGATTGA
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| Protein sequence | MSIILLDIGS VLVSVDFMRF CRDVALDSVS GAQEIYRKYC TGELKAKLET GFIAPFEYLD
VIAIDPHSRT MPLHELKLRW QDIFEPLEGA VGAVKRLKEH HSIWIMSDTD PLHFTFLLNN
YPVLRDADRY YLSFEQGKMK NSVEAFKRVL ENSGCGADEF VLIDDKEENC ASASEAGIRS
ILFHNWRDTL ALLYENKD
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