Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0998 |
Symbol | |
ID | 6462250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1033109 |
End bp | 1033864 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727249 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_002017899 |
Protein GI | 194336105 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGCCA AACGGATCAT CCCCTGCCTC GATGTTCGAG ATGGCAGGGT GGTAAAGGGA ATAAACTTTG AAGGGCTGAG AGATGCAGGC TCCATCCTTG AACAGGCACG CTTTTACAAT AATGAACTGG CCGATGAACT TGTCTTCCTT GATATTTCAG CATCACTCGA GTCACGCAAA ACGACGCTTG AAGAGGTACT GAAAGTTTCC GGAGAGATCT TCATTCCTCT CACCGTCGGA GGCGGAATCA ACTCGGTCGA GCGCGCCAGG GAGGTTTTTC TGCACGGTGC TGACAAGGTT TCTGTCAATA CCGCAGCAGT CAATGACCCC TTCCTGATTA CCCGGATTGC AGAAAGATAT GGATCCCAGG CTGTTGTGGT TGCCATCGAC ATCAAAAAAA CGGGGGAAGA TTATCTGGTC TTTACCCATT CAGGCAAAAA GCCAACCTGC TATGAAGCAC TTGAATGGGC CCATAAAGTC CAGGAACTCG GCGCAGGAGA GATCCTGCTG ACCAGTATGG ATCGGGACGG TACAAAAGAG GGATATGACA ACGATATTCT CGCCAAAATA TCAACATCAG TCCACATTCC CGTCATCGCA TCCGGAGGCG CAGGCAATCT TGAACACCTC TATGACGGTT TTACCAAAGG CCATGCTGAC GCAGCGCTTG CAGCATCAAT CTTCCACTTC CGCCAGCACT CAATCCGTGA AGCCAAAGAG TACTTGCGGC AAAGAGGCAT CACGGTCAGA ATCTGA
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Protein sequence | MLAKRIIPCL DVRDGRVVKG INFEGLRDAG SILEQARFYN NELADELVFL DISASLESRK TTLEEVLKVS GEIFIPLTVG GGINSVERAR EVFLHGADKV SVNTAAVNDP FLITRIAERY GSQAVVVAID IKKTGEDYLV FTHSGKKPTC YEALEWAHKV QELGAGEILL TSMDRDGTKE GYDNDILAKI STSVHIPVIA SGGAGNLEHL YDGFTKGHAD AALAASIFHF RQHSIREAKE YLRQRGITVR I
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