Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0944 |
Symbol | |
ID | 6460896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 983546 |
End bp | 984670 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727198 |
Product | sodium ion-translocating decarboxylase, beta subunit |
Protein accession | YP_002017848 |
Protein GI | 194336054 |
COG category | [C] Energy production and conversion |
COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTTT TTGGGTATTC CGGTTTTGCC AATGCAACTC CGGGACACCT GTTGATGATT CTTGTCGGAA TGGTATTCAT CTACCTGGCG ATCCGCTATG AATATCAACC GATTCTTCTG GTTCCGATCG GTTTCGGTAT TCTGATCGGC AATACCCCGT TTATCGAGCA TGGTGGTATG GCTCTTGGTA TCTATCAGGA TGGCAGCGTC CTGAACTACC TCTACCAGGG AGTACTGAAA GGAATATTTC CCCCCCTGAT TTTTCTTGGA ATAGGGGCCA TGACCGATTT TTCACCGCTG ATTTCAAATC CGAAGCTTAT CCTGCTCGGT GCTGCGGCGC AGCTCGGCAT TTTCATGACC TATCTTGGAG CTATCTCCCT CGGCTTCACC AATCCCGAAT CAGCTTCGAT CGGTATCATC GGAGGCGCTG ATGGCCCGAC AGCAATTTTT CTCTCTTCCC GGCTTGCTCC GCATCTCGTC GGTTCCATAG CCATCGCAGC ATACACCTAT ATGGCGCTTG TCCCGCTTAT TCAGCCACCG ATCATGCGCC TTTTGACGAC CCAAAAAGAG CGCAGAATCA AAATGAAGCC GCCTCGTTCG GTTACCAAAA TCGAGAAAGT CATGTTCCCT GTATTCGGTC TGCTCCTGAC CGGATTTATT GCTCCCGGCT CCCTACCGCT GCTCGGTATG CTTTTTCTGG GCAATCTGCT CAAAGAATCA ATGGTCACAA AACGGCTTGC TGATACGGCA AAAAATGCCA TGATCGACAT CGTAACCATC ATTCTTGGCG TTACCATCGG AGCGTCAACT CAGGCGACAA CATTTCTGAC CCACAATTCT GCCCTTATTT TCATCCTTGG CGCAACGGCA TTCATGTTCT CAACGGCTGG CGGAATTCTG TTTGCAAAAT TCATGAACAT TTTTCTTTCA GAGGGAAACA AAATCAACCC GTTGATCGGC GCTGCAGGTG TTGCTGCGGT TCCTGAAAGC GCCCGTGTAG CGCAAATGGA GGGGCTGAAG GCTGACCCTG AAAATCATCT GCTCATGCAT GCCATGGCCC CGAACGTTTC CGGTATCATC GGTTCAGCCA TTGCCGCTGG CATCATGATG AGCTTCATGG TGTAA
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Protein sequence | MQFFGYSGFA NATPGHLLMI LVGMVFIYLA IRYEYQPILL VPIGFGILIG NTPFIEHGGM ALGIYQDGSV LNYLYQGVLK GIFPPLIFLG IGAMTDFSPL ISNPKLILLG AAAQLGIFMT YLGAISLGFT NPESASIGII GGADGPTAIF LSSRLAPHLV GSIAIAAYTY MALVPLIQPP IMRLLTTQKE RRIKMKPPRS VTKIEKVMFP VFGLLLTGFI APGSLPLLGM LFLGNLLKES MVTKRLADTA KNAMIDIVTI ILGVTIGAST QATTFLTHNS ALIFILGATA FMFSTAGGIL FAKFMNIFLS EGNKINPLIG AAGVAAVPES ARVAQMEGLK ADPENHLLMH AMAPNVSGII GSAIAAGIMM SFMV
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