Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0879 |
Symbol | |
ID | 6461074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 919921 |
End bp | 921060 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642727134 |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_002017784 |
Protein GI | 194335990 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGCTC AAGATTTAAA ACAATTGGCT TTAGAGCATG GCACACCGTT ATTTGTGGTC GATCATGAGG TTTTGCGTGC CAATTATCGT GAGTTCAAGC GGCATCTTCC GAGGGTTCAA GCCTATTTTG CGGTTAAAGC AAACTCCGCA AAAGAGATCG TTAAAACCTT CTATGATGCC GGCGCCAGCT TTGATGTTGC ATCAATGCCT GAGTTTCTTG CGGTCTATGA AAATATTAAA AGCCTGACGC CTGAAGAGCA ACAGGATTTT ATCTGGGATA AAATCATCTA TGCCAATCCG ATAAAGCCAA TACCCACGCT CAAGGAACTC GACCAGTATA AACCGTTGGT CACCTTTGAT AATGAAGATG AAATAGCGAA AATCGCTACC TATGCACCGA ATACCGGTCT TGTTTTACGC ATAAAAGTGC CGAATACCGG AGCCATGGTA GAGCTCTCTT CCAAATTTGG TGCAGACCCT GGAGAGGCTG TTGATCTTAT AGAAAAAGCG TTCAGAAGTG GACTGGTGGT TGAGGGTTTA AGCTTCCATG TCGGCAGTCA GTGCACAAAT TTCCAGAATT ATATTCAGGC CCTTAATCTG GCGGCCAATA TTTTTAAGGA ATCGTGGGAA AGAGGGTATA CGCAGGTAAA AATCCTTGAT ATTGGCGGCG GTTTTCCCGC TCCCTATGAC AAAAATGTGA GACCTTTTGC CGAGCTTGCC ATCATGCTCA ATTCCGAAAT TGACCGGCTC TTTCCGCCCG ATATTGAAAT CATAGCCGAA CCGGGAAGAT TTTTAGTGGC AACTGCCGCC TGGGTTGTGA TGGAGATTAT CGGTACAGCC TATCGTGACG GTAAAAGATG TTATTACGTC AATGACGGGG TTTATCATAC CTTTTCAGGG ATTATCTTTG ATCACTGCGA ATATCCTGTA AAATCCTTCA AAGAGGGCAA TGAGAAAATG TGTGCAGTGT ATGGCCCTAC CTGTGACGCT CTCGACACTA TCACTATGGC GAATCTTTTG CCCGAAGACC TTTCGATTGG GGATTTACTC TATAGTGAAA ATATTGGAGC CTACAGTCAT GCGTCATCGA CTTACTTTAA TGGCTTTCCG CCAGCAAAGG TTTTGCATAT CAACAGATAG
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Protein sequence | MIAQDLKQLA LEHGTPLFVV DHEVLRANYR EFKRHLPRVQ AYFAVKANSA KEIVKTFYDA GASFDVASMP EFLAVYENIK SLTPEEQQDF IWDKIIYANP IKPIPTLKEL DQYKPLVTFD NEDEIAKIAT YAPNTGLVLR IKVPNTGAMV ELSSKFGADP GEAVDLIEKA FRSGLVVEGL SFHVGSQCTN FQNYIQALNL AANIFKESWE RGYTQVKILD IGGGFPAPYD KNVRPFAELA IMLNSEIDRL FPPDIEIIAE PGRFLVATAA WVVMEIIGTA YRDGKRCYYV NDGVYHTFSG IIFDHCEYPV KSFKEGNEKM CAVYGPTCDA LDTITMANLL PEDLSIGDLL YSENIGAYSH ASSTYFNGFP PAKVLHINR
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