Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0821 |
Symbol | |
ID | 6461217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 855805 |
End bp | 857529 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642727073 |
Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC |
Protein accession | YP_002017727 |
Protein GI | 194335933 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.17374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCT TTTTTCGACT GATCGCACTG GTCAAACCAT ATTTCTGGTG GATGGCCCTC GCCGCACTCA TCGGCTTCGC CACAACCGGC AGCGGCATCG GCCTCCTGAT GACCTCCGCC TACATCATCG CCAAGGCGGC CCTGCAACCG CCGATGGTCA CCCTGCAACT CGGCATCGCG GGAGTACGCT TTTTCGGCCT TGCACGGGGA GTCTTCCGCT ACATCGAAAG GCTCATCTCC CACAACATCA CCTTCAAGAT TCTTGCAAAA CTGCGGTTAT GGTTTTACGA CGCCATTGAG CCCCTCGCAC CGGCACGCCT CATGCACTTC AAGAGCGGCG ACCTGCTGCA ACGGGTTGTG GACGACATCC AGAGCCTCGA AAACATCTAC ACCAGAGTGC TTGGCCCACC GCTCACCGCA CTGCTTGTGG CCGCACTGAT GTGGTTTCTG CTCGGCGTCT ACTCCCTGCA GGCAGCGCTG CTCATCCTCT GCTTTCACTC CCTTGCAGGC ATTGGCGTCC CGCTCCTCAC CCGGCAGTTG AGCCGTGGCC TCTCGGTGGG TATCATGAAC CGCAAGGCAG AGCAGCAGGT ACTGGCGCTC GACCTCTTCC AGGGGATCGG AGAGCTGCAA CTTTACGGAC AACTTCCGGC GCACCTCGCC GCCATGCAGA GCGCCGAAAG CGGCAAGCTG CAGCTTCAAA GAAAGAACGC CATCATCGAA GGGCTACACG AATCCCTTAC CGGCCTCCTC ATGAACGGCG CCCTCATCGC CATTCTCTGG GCGCTCATTC CCTCCATCTC CACCGGCGTG GTCAACGGGA TTTCACTTAC CGTCATCACC CTCGCCGTCA TGGCCTCGTT TGAACCTTTT CTTCCGCTGC CCTCCACCCT CAAGCACCTC GAAGCTGATC AGCTCGCCGG AGAACGCCTT TTTGAAATTC TCGATGCCAA GCCGGAAACG GTCGCCCCGC TCACTCCCCT CCCCTTTCCG GCAGAGCATT CCATTCAGGT TGAGCAGCTC AGCTTCACCT ACCCCGGCAG CGATACAAAA GCGCTCGACC GCCTCACCTT CACCGTTCTC CCCGGAGAGC ATATCGCCAT CGTCGGCCCG AGCGGTGCAG GCAAATCGAC CATCACCTCT CTCTTCATGC GCTTCTGGAA CAGCAGCGAA GGGAGCATCT CCATTGGCGG CCACAACATC ACCCTCTTCG ACCCTGAAGA GCTGCGCCGC CAGATAGCCC TCGTCTCGCA GCGCACCTAC CTCTTCGCTG AAACCATCCG CGAAAACCTG ACCCTCGCCG CCCCGGATGC CACCGACGAC GATCTCAAAA AAGCGCTCAC CGCCGCCGGG CTCAGCCACT TCACCGCAAA ACTCGACGAA TGGTGCGGTC AGCACGGTAT GAAACTCAGC GGTGGAGAGC GCCAGCGCAT CGCCATTGCC CGAGTCCTGC TGCAACATGC CCCGATCATG ATTCTTGATG AAGCAACGGC CAACCTTGAC GGCGTAACGG AGAGAGAGGT AACCCAAACC CTGAACGCCA TCAGCTCAGG AAAAACGCTG ATAACCATTA CCCACCGCTT AAAGGCAATG GAACAATACG ACCGGATTCT TGTGCTTGAG AAGGGAAAGA TTGTGGAGCA GGGTCTGCAT AGGGAGCTTA TGGACGGGAA CGGGCTCTAC CGGAGGATGT GGGAGTTGCA GCATGTGGCG GAGATGACGG GGTGA
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Protein sequence | MKTFFRLIAL VKPYFWWMAL AALIGFATTG SGIGLLMTSA YIIAKAALQP PMVTLQLGIA GVRFFGLARG VFRYIERLIS HNITFKILAK LRLWFYDAIE PLAPARLMHF KSGDLLQRVV DDIQSLENIY TRVLGPPLTA LLVAALMWFL LGVYSLQAAL LILCFHSLAG IGVPLLTRQL SRGLSVGIMN RKAEQQVLAL DLFQGIGELQ LYGQLPAHLA AMQSAESGKL QLQRKNAIIE GLHESLTGLL MNGALIAILW ALIPSISTGV VNGISLTVIT LAVMASFEPF LPLPSTLKHL EADQLAGERL FEILDAKPET VAPLTPLPFP AEHSIQVEQL SFTYPGSDTK ALDRLTFTVL PGEHIAIVGP SGAGKSTITS LFMRFWNSSE GSISIGGHNI TLFDPEELRR QIALVSQRTY LFAETIRENL TLAAPDATDD DLKKALTAAG LSHFTAKLDE WCGQHGMKLS GGERQRIAIA RVLLQHAPIM ILDEATANLD GVTEREVTQT LNAISSGKTL ITITHRLKAM EQYDRILVLE KGKIVEQGLH RELMDGNGLY RRMWELQHVA EMTG
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