| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0806 |
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| Symbol | |
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| ID | 6461258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 843513 |
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| End bp | 844463 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642727059 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002017713 |
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| Protein GI | 194335919 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTTA CCCTGCAAAT CCTGACCATC GTGCTTTCCG GGGCCGCTGT TGCCTCGCTT
GTGTTCGCGT TGTTAAATTG GTTGGTCGAC AACAATGCCC TCAAAAAACG GCTCACCAAA
ATCATTCGCC AAAGCAGGGC ACCAGCCGCC ACCTCCTTGT CCAAAACGGC CAACACCGGA
AAAGTAGCTA CCGTAATCAA CATTCTCTCC AAACTCTCGC TCCCGGAAGA GGGGTGGCAA
AGCTCCGGTG TTCAGATCAA GTTTTTGCAA GCTGGCATCC GCAACAAAAA CGCACCTCAG
AACTTCTTTG CCGTTAAAAC CCTGTTCACA TTGGTGCTGC CGGTGGTTCT TGCTTTGTTT
CTGCATTTCA CTCAGCCCCT CATGCCCTTG GCTCGTGTCA TGATTCTGGT GCTGTTCACA
GCCGCAGCAG GCTACTACCT GCCCGAAATG TTGCTGCGTT TCATCACCCA AAATCGTATC
GAACGCATGC GTAACAGTTT GCCCGACATG CTCGACCTCA TGGTTGTCTG TACCGAGTCG
GGTATGGGTA TCGACGCTGC CATTGCCCGC ATATCGCGTG AAATGGTCCG CACCAACCCT
GACCTTGCCG AAGAGTTTTA CCTCTCGACC CTCGAAATGC GTGCCGGAGC CAACCGCATC
GACGCCTTGC GCAACCTCGC ACTGCGCTCA CGCCTCGATG ACCTGCAAAA CCTTGTCTCT
GTGCTCGTAC AGGCCGATAG ATTTGGCACC AGCCTGGTCG ACTCGTTGCG CGTGCATTCC
GACATGATGC GTACATGCCG CACCCAACGC GCAGAAGAAC TTGCCGCCAA AATTCCCGTC
AAAATGACGC TGCCGCTCGT CTTGTTTATT TTTCCGGTGC TCATGCTGGT GTTGCTGGGG
CCGGCAATTA TTCAGGTTAT TCAAATCTTC TCACAAAAGC CCTTGCCATG A
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| Protein sequence | MQVTLQILTI VLSGAAVASL VFALLNWLVD NNALKKRLTK IIRQSRAPAA TSLSKTANTG
KVATVINILS KLSLPEEGWQ SSGVQIKFLQ AGIRNKNAPQ NFFAVKTLFT LVLPVVLALF
LHFTQPLMPL ARVMILVLFT AAAGYYLPEM LLRFITQNRI ERMRNSLPDM LDLMVVCTES
GMGIDAAIAR ISREMVRTNP DLAEEFYLST LEMRAGANRI DALRNLALRS RLDDLQNLVS
VLVQADRFGT SLVDSLRVHS DMMRTCRTQR AEELAAKIPV KMTLPLVLFI FPVLMLVLLG
PAIIQVIQIF SQKPLP
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