| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0757 |
|---|
| Symbol | |
|---|
| ID | 6461358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 788309 |
|---|
| End bp | 788749 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642727011 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002017666 |
|---|
| Protein GI | 194335872 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0082661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGTAT ATCTTGATAA TTGCTGTTTC AACAGACCCT TTGATGACCA GTCATTGTTA
AGCGTACGAC TGGAAACAGA AGCAAAGTTA GGTATTCAGG AGCAAATAAA ATCAGGACGT
TTTTCGTTGG GGTGGTCTTA CATTCTTGAT TTTGAAAATA ATGCTAATCC TTTCCCTGAA
AAAAGGATTG AAATTCAACG ATGGAAAGAT GTGGCTGATT TATTTGTTAA TGAAACAGAG
GAGATTCTGC AGAAAATGAA TGAGCTGACA GCTATCGGAT TAAAATCTCT TGATGCTTTA
CATGTTGCAT GTGCTTGTTC ATTACAATGC CAATATTTTT TAACGGTAGA TAAAGGGCTT
TTAAAGAAAA CAAAAGAATA CCCGGAGATA AAGATAATAA ATCCTGTAAA TTTTATTATT
GAATGGGATA CTAAACAATG A
|
|---|
| Protein sequence | MRVYLDNCCF NRPFDDQSLL SVRLETEAKL GIQEQIKSGR FSLGWSYILD FENNANPFPE
KRIEIQRWKD VADLFVNETE EILQKMNELT AIGLKSLDAL HVACACSLQC QYFLTVDKGL
LKKTKEYPEI KIINPVNFII EWDTKQ
|
|---|
| |