| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0739 |
|---|
| Symbol | |
|---|
| ID | 6461401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 772452 |
|---|
| End bp | 772979 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642726996 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
|---|
| Protein accession | YP_002017651 |
|---|
| Protein GI | 194335857 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA AAAAAACAGA TACTAACCGA CCGACTGTCG GCATCATCAT GGGTTCTGAC
TCTGATTTCG ACATTATGAA GGAGGCGGTA CTGGTTTGTG ATGAGTTCGG TATTGCCTCA
GAGATTTCGG TTATTTCTGC TCACCGCACA CCGCACGACC TCGAAGCATA CGCCACTTCG
GCCATTGAAC GTGGCCTGAA AGTTATTATT GCCGGAGCTG GCGGCGCGGC GCATCTGCCG
GGTGTTACTG CAGCCATGAC GGTGCTGCCG GTTATCGGCG TGCCGATTTT CAGCAAAAAA
CTTAACGGTC AGGACTCGCT CTACTCCATC GTGCAGATGC CTGCGGGCAT TCCTGTGGCG
ACAGTAGGTA TCGACAATGC CCGGAATGCC GCTCTGCTTG CCGTCCAGAT TCTTGCCCTC
TCTGATGAAG CGCTGATGGC AGCACTGCTT GAGTTCCGCA AAAAACTTGC CGACGCATCC
CGTCAGAAAA CTGCGAAAAT CCGTGAAAAG CTCCATGCAA AAAGCTGA
|
|---|
| Protein sequence | MTQKKTDTNR PTVGIIMGSD SDFDIMKEAV LVCDEFGIAS EISVISAHRT PHDLEAYATS
AIERGLKVII AGAGGAAHLP GVTAAMTVLP VIGVPIFSKK LNGQDSLYSI VQMPAGIPVA
TVGIDNARNA ALLAVQILAL SDEALMAALL EFRKKLADAS RQKTAKIREK LHAKS
|
|---|
| |