Gene Ppha_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0726 
Symbol 
ID6461440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp757155 
End bp758414 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content49% 
IMG OID642726983 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002017638 
Protein GI194335844 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA AGAATTTCGA TACTATTGAT GCCGCTCTTG AAGATATTCG TCAGGGAAAA 
CTGGTCATTG TTATTGATGA TGAGGATCGT GAGGATGAGG GCGATTTTAT TGGCGCTGCC 
GACAAGGTGA CCAATGAAAT GGTAAATTTT ATCACGAGGG AGGCGCGGGG GCTGCTCTGC 
GTTGCTGTCA CCATGGATCG CGCCAAAGAG CTGCAGCTTG ATCCGATGGT TCAGAGAAAT 
ACCTCCCAGC ATGAGACCAA TTTTACGGTC TCCGTTGATG CGATTGCCGA GGGGGTAACT 
ACTGGTATTT CCGTTTATGA CAGGGCAATG ACCATCAAAA TGCTTGGCGA TCTCTCTTCG 
ACGGCGGATG ATTTTTCCCG TCCTGGCCAC ATATTTCCGC TTCGGGCGAT GGATGGGGGT 
GTTCTTCGGC GTGTGGGGCA TACGGAAGCC GCAGTCGATC TTGCCCGTCT GGCGGGTTGC 
AGTCCGACAG GATTGCTCTG CGAAATTCTG AACGATGACG GCAGTATGGC CCGGCTTCCA 
CAACTGATCA AGCTGAAGGC GAAATTTGGT TTGAAGCTGA TCACCATCAA GGAGCTGGTT 
GCCTATCAGA TGCAACGGAA TAAACTGGTG CAACGGGCAG TCGAATCAAG ATTGCCGACT 
ATATACGGGG AGTTCAGACT GATTGCCTAT GAATCGTTTA CTGACCAGCA TAACCATATG 
GCTTTTGTGA AGGGTGATGT AACCACTGAC GAGCCGGTTC TTGTCAGGGT TCACTCGCAG 
TGTGCTACCG GCGATACCTT TGCCTCACTT CGCTGTGATT GTGGCAACCA GCTTGCTTCT 
GCGCTCACCA TGATAGAAAA AGAGGGGCGC GGGGTGTTGA TCTACCTCAT GCAGGAGGGT 
CGTGGTATTG GACTGATCAA TAAACTGAAA GCCTATAATC TTCAGGATCA AGGGTATGAT 
ACGGTTGAGG CCAATGAAAA GCTTGGTTTC AAAGCCGATC TGCGTGATTA TGGTATTGGT 
GCACAGATTC TCAAGGATCT TGGTGTCCGC AAAATGAAGC TGATGACCAA CAATCCAAAA 
AAAGTGGTTG GTCTTGAAGG GTACGGTCTG GAAATCGTTG AGCGCGTCCC GCTTGAGATG 
GCCTCAAACC CGATGAATCA GTTCTATCTG GACACAAAAC GTGACAAGTT GGGCCACATG 
ATCGGCTGTT CCTTCGGCCC CGAAAATTTT CATATAGAAA AAACAGCAAC GAAACCGTAA
 
Protein sequence
MDKKNFDTID AALEDIRQGK LVIVIDDEDR EDEGDFIGAA DKVTNEMVNF ITREARGLLC 
VAVTMDRAKE LQLDPMVQRN TSQHETNFTV SVDAIAEGVT TGISVYDRAM TIKMLGDLSS 
TADDFSRPGH IFPLRAMDGG VLRRVGHTEA AVDLARLAGC SPTGLLCEIL NDDGSMARLP 
QLIKLKAKFG LKLITIKELV AYQMQRNKLV QRAVESRLPT IYGEFRLIAY ESFTDQHNHM 
AFVKGDVTTD EPVLVRVHSQ CATGDTFASL RCDCGNQLAS ALTMIEKEGR GVLIYLMQEG 
RGIGLINKLK AYNLQDQGYD TVEANEKLGF KADLRDYGIG AQILKDLGVR KMKLMTNNPK 
KVVGLEGYGL EIVERVPLEM ASNPMNQFYL DTKRDKLGHM IGCSFGPENF HIEKTATKP