Gene Ppha_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0688 
Symbol 
ID6461538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp708620 
End bp709630 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID642726945 
Productintegrase family protein 
Protein accessionYP_002017600 
Protein GI194335806 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGACT CATCATTCAC CCCCTCATCC ACCCTGTTTC GGGGATCAAC GCTACCGGTC 
GCTGACTTTC TTGAAAAGCT GAGCACGCTA AAAAATTTGT CGCCCAACAC GGTTATTGCC 
TACAGAACCG ATCTGTTCCA GTTTTTTTCC TTTCTTGCAC AGCATCTTGG GCTTGCCGAT 
TTGAGCCTTT TTGATCCGGA GCAGGTAACG ACGGTTGAGG TGCGGCTTTT TATGGCGGCA 
TTGATTGAAC GTGGCGTTCG GCAGCGATCC ATTGCAAGAA AACTTGCTTC AGTTAAAAGC 
TTTTATCGCT ATCTGCAGGA GAGTGGACAT ATCAGGAACT CTCTTTTTTC TGCTCTTGCC 
ACGCCTCAGT ATCCGAAGCG TGTTCCCGGT TTTTTAACAG AGCAGCAGAC AGAAAAGTTT 
TTTAACGAGC TTCTTCCGCA GAGTGCGCAA GGATTTCGCA AGCCTGAAAA AAATGAACTT 
GATGAATCTT TTATTTGCGA ACGTGATCGC AGTATTCTTG AGTTGCTCTA TTCGAGTGGG 
CTCCGAATTT CGGAATTGAT TGGATTAAAG GTTGGAGAGC TTGATCTTGA GAGAGGATAT 
GTCAAATTGA CCGGAAAGGG GAGGAAGCAG AGAATTGTCC CTGTTGGGCA GCAGGCTGTT 
GATGCGCTTA AAAAATATTT TGAAGTCCGG AGAAACTTCT TTAGAATGAA GAGGACGGGG 
GATGCGGGCG AGTTGCTCCA CGTCTTTGTA ACCAAGAGTG GCAAAAAGCT TTATCCTATG 
CTTGTGCAGA GATTGACCAG GAAGTACCTC ACGTCGGTTA CTGACCAGAA AAAGAAAAAT 
CCACATCTCT TGCGTCACAC GTTTGCCACT CATTTGCTCA ATAGCGGGGC AGATCTCAAT 
AGTGTCAGTG ACATGCTTGG ACACAGCAAT CTGTCAACAA CTGAAATCTA CACGCATGTT 
ACCTTTGAGC GCCTGAAGGA GGTTTACCGG AAGGCGCATC CCAACGCATA A
 
Protein sequence
MKDSSFTPSS TLFRGSTLPV ADFLEKLSTL KNLSPNTVIA YRTDLFQFFS FLAQHLGLAD 
LSLFDPEQVT TVEVRLFMAA LIERGVRQRS IARKLASVKS FYRYLQESGH IRNSLFSALA 
TPQYPKRVPG FLTEQQTEKF FNELLPQSAQ GFRKPEKNEL DESFICERDR SILELLYSSG 
LRISELIGLK VGELDLERGY VKLTGKGRKQ RIVPVGQQAV DALKKYFEVR RNFFRMKRTG 
DAGELLHVFV TKSGKKLYPM LVQRLTRKYL TSVTDQKKKN PHLLRHTFAT HLLNSGADLN 
SVSDMLGHSN LSTTEIYTHV TFERLKEVYR KAHPNA