Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0669 |
Symbol | |
ID | 6461572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 689759 |
End bp | 690745 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642726930 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_002017585 |
Protein GI | 194335791 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGATC AAAGGCGGTT ACTGTCGGTT AACGACCTGC GGGTGCATTT TTCCGGGCGG AAGAGTGGTG GATTGGGAAA ACCTCTTTTG ATACCTGTGG TTAATGGAGT CTCATTTGAG GTGTTGCAGG GAGAGACGCT TGGCCTGGTG GGTGAGTCGG GCTGCGGAAA AACGACTCTC GGGCGGGCCC TTATCCGTCT TGGACCCTCA ACAGTGACTG GAACGATTAT GTTTGAAGGG AGGGAGATCT CTGCCATCAG CAATCATGAG TTCCGTGCGC TTCGCAAAGA GATCCAGATG ATTTTTCAGG ATCCTTTCGG CTCGCTGAAT CCACGCATGA CGGTTGGCCA GGTACTTGAG GAGGTACTGC TGGTTCACCG CATTGCCCGG GGGGATGCTG CCCGACGCAG GATTGAGGAG TTGCTCGATC TGGTCGGTCT GAGCAGGGAG TACCGCAACC GTTATCCGCA TGAGTTTTCC GGAGGGCAAC GGCAGCGCAT CGGTATTGCA CGTGCGCTGG CAGTCAATCC GAAATTTATC ATCTGTGATG AGCCTGTCTC TGCTCTTGAT GTATCGATTC AGTCGCAGAT CATCAATCTG CTCAAGGATC TCCAGCGGGA TCTGGGGTTG ACCTATCTTT TCATTGCACA TGACCTGTCG GTTGTTGAAT ACATTTCCGA CAGGGTTGCG GTCATGTATC TCGGAAAAAT TGTTGAGATT GCTGAATCTG CTGAACTCTA TGCCAATCCA AAGCATCCCT ATACAAGAGC GCTTCTGTCG GCAATTCCCA ATCCTGAATT CGGAGGAAAA AAAGAGCGGA TTTTGCTGAA AGGAGATTTG CCTGGGCCCA TGAATATCCC TTCAGGATGC GGTTTTCATC CGCGATGTCC CTCCGCAACG GCTGAGTGCA GCCAAAAAGA GCCCAGGCTT CAGGAACTCA CTTCTATTAA TAATGGACAT CAGGTAAGCT GTTTTCTCTA TGAATGA
|
Protein sequence | MMDQRRLLSV NDLRVHFSGR KSGGLGKPLL IPVVNGVSFE VLQGETLGLV GESGCGKTTL GRALIRLGPS TVTGTIMFEG REISAISNHE FRALRKEIQM IFQDPFGSLN PRMTVGQVLE EVLLVHRIAR GDAARRRIEE LLDLVGLSRE YRNRYPHEFS GGQRQRIGIA RALAVNPKFI ICDEPVSALD VSIQSQIINL LKDLQRDLGL TYLFIAHDLS VVEYISDRVA VMYLGKIVEI AESAELYANP KHPYTRALLS AIPNPEFGGK KERILLKGDL PGPMNIPSGC GFHPRCPSAT AECSQKEPRL QELTSINNGH QVSCFLYE
|
| |