| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0648 |
|---|
| Symbol | |
|---|
| ID | 6461624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 664429 |
|---|
| End bp | 664860 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642726909 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002017564 |
|---|
| Protein GI | 194335770 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.635682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAC CCAGGCGTCA ATTCGAGATT ATCCAGGAGC AGGCGTTTCG GGAGTTGCCT
TATGAGTGTT GCGGGCTCCT GGTCGGCATT CAAAACAGTG ATCACAGGGG AAATGTAGAG
AATATTGTCT ATGAAGTTGC CCCCTGCAGG AACTGCCTCT ATTTTGGTAA AGAGCAGGGT
TTTGAGATTG CCCACCAGGA GTATCTTGAT GTTGAGCGTG AGGCCAGAAT GCTTGGATAT
GAAATTATCG GCTCTTACCA TTCCCATATC AATTCTCCGG CCCTTCCGTC ATTGCATGAT
GTTGATTTTG CACGTCCCGG CCATACGCTG CTTATTATTT CACTGATGAA TGCGCAACCA
AAGGAGGTTA CAGCATGGCT GCGGCGGGGG TCGGGAGGGG TTCATCAGGA ACAGATTCGT
GTGCTGGAAT AG
|
|---|
| Protein sequence | MKLPRRQFEI IQEQAFRELP YECCGLLVGI QNSDHRGNVE NIVYEVAPCR NCLYFGKEQG
FEIAHQEYLD VEREARMLGY EIIGSYHSHI NSPALPSLHD VDFARPGHTL LIISLMNAQP
KEVTAWLRRG SGGVHQEQIR VLE
|
|---|
| |