Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0630 |
Symbol | |
ID | 6461691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 609055 |
End bp | 609936 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642726892 |
Product | inner-membrane translocator |
Protein accession | YP_002017547 |
Protein GI | 194335753 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTG ATCCTCTTGT TATTTTTCTG CAAATCTTGC GTCTTGCCGT TCCCTATGTG CTTACCTCTG TTGGGGCAAC GTTTTCGGAG CGGGGCGGGG TGGTTAATCT GGCACTTGAG GGGATGATGC TTGTTGGTGC GTTTGGTGCG GCTTTTGGTC AGTACCGGAG CGGGTCGGCC CTGGCGGGCA TTTTGCTGGC TCTGGTGTGC GGCCTTTGTG TTGCGCTGCT TTTTGCTTTT GTGACGGTTA CCTTGAAGGC TGACCAGATT GTTGCCGGTA TTGCTATCAA TATTCTTGTT ATGGGCGCTA CCCGTTTTGG GCTCAGCCTG TTGTTCGGAA GTTCGATGAA TTCGGAGCGG ATTGCCGGTA TTGCGGTTCC CTCTCTTTTG CTTGATCCTC TTTTTCTTGC TGCTGTGCTC TCTGTTGTTG CAGGTTATCT GGTGCTTTTC AGGACTCCTT ATGGTCTGAG GCTTCGGGCA ACGGGTGAAA GTGCTGAAAC GGCCGACAGT GCAGGTATCA ATGTGGATCG CATGCGCTAT TCCGGCGTGC TTGTTTCTGG TGCACTTGCG GCTCTTGGTG GAGCTTTTCT TGTTTTTCAG CAGCATACCT TTACTGATAA TATGTCGGCC GGGCGGGGTT ATATCGCTCT TGCGGCTATG ATTATCGGCA AGTGGAACCC GGCTGGAGCT GCACTTGCAA GTTTGTTTTT TGCAACGACC GAATCGATGG AGATTTGGCT CCAGACGGGG TGGATTCCCT CGCAGTTGGT GCAGTCACTC CCTTATGTCA TAACGCTGGT TGTGCTTGCC GGATTTGTTG GCAGGGCTTC AGCGCCGAGG GATGCGGGTA CTGCGTTTGA AAAAAACCGC AAATCAGATT AG
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Protein sequence | MEIDPLVIFL QILRLAVPYV LTSVGATFSE RGGVVNLALE GMMLVGAFGA AFGQYRSGSA LAGILLALVC GLCVALLFAF VTVTLKADQI VAGIAINILV MGATRFGLSL LFGSSMNSER IAGIAVPSLL LDPLFLAAVL SVVAGYLVLF RTPYGLRLRA TGESAETADS AGINVDRMRY SGVLVSGALA ALGGAFLVFQ QHTFTDNMSA GRGYIALAAM IIGKWNPAGA ALASLFFATT ESMEIWLQTG WIPSQLVQSL PYVITLVVLA GFVGRASAPR DAGTAFEKNR KSD
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