| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0589 |
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| Symbol | |
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| ID | 6461781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 573962 |
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| End bp | 575104 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642726861 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_002017516 |
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| Protein GI | 194335722 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000155049 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG CTCTTATAAC CGGTATAACC GGGCAGGATG GCTCTTATTT GGCGGAACTG
CTGCTTGAGA AGGGGTATGA GGTGCATGGT ATCAAGCGGC GGGCCAGCTC GTTTAATACC
CAGCGGATTG ATCATCTCTA TCGTGATCGT CATGATATTG AAAATGAGGG CTCTCCGGTT
TCTCATCACT CGTCGCTTTT TCTCCATTAT GGTGACTTGA CCGACAGCAG CAATCTGACT
CGCATTATTT CGGAGGTGCA GCCTGATGAG GTCTATAATC TTGGTGCGCA GAGTCATGTT
GCGGTGAGTT TTGAGTCGCC GGAGTATACG GCTGATGTTG ATGCGATGGG TACGCTGCGT
CTGCTTGAGG CGATTCGCTT TCTGGGGCTT GAGAAGAAAA GCCGTTTTTA CCAGGCTTCG
ACGTCGGAGC TCTTTGGTTT GGTGCAGGAG ATTCCGCAGC GGGAGAGTAC CCCCTTTTAT
CCCCGCAGTC CCTATGCTGT GGCGAAGCTT TATGCCTACT GGATTACGGT GAACTATCGT
GAGGCCTACG GGATGTACGC CTGCAACGGT ATCTTGTTCA ACCATGAGTC GTCGCGGCGG
GGTGAGACTT TTGTGACGCG CAAGATTACG CGGAGTCTTG CCAATATCAC CCAGGGGCTT
GAGGAGTGCC TCTATGTCGG CAACATGAAT GCCTTGCGCG ACTGGGGCCA TGCGAAGGAT
TATGTGCGGA TGCAGTGGAT GATGCTGCAG CAGGAGTTGC CGAGGGATTA TGTGATTGCG
ACCGGTGTGC AGTACAGTGT TCGCCAGTTT ATTGAAAAGT CGGCGGCGCA GCTTGGGATC
TCCATTCGCT GGGAAGGGGA GGGGCGAGAG GAGATTGGCG TTATTGAGAA CCTTTCCACT
CCGTATGCAT CGCTCCGTGA GGGGAGTGTG ATTGTCCGGG TTGATGCGCG TTACTTCCGT
CCTGCGGAGG TGGAGACGCT GCTTGGTGAC CCGGCAAAGG CGAAGGCTGA TCTGGGTTGG
GTGCCGGAAA TCACGCTCGA CGAGATGGTT GAGGAGATGG TTGCGCATGA TCTTGATCTT
GCCCGCCGCC ATGCCCTCCT CAAAGCCAAC GGCTATATCG TAGAAGTCAG CAAGGAGAGC
TGA
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| Protein sequence | MKVALITGIT GQDGSYLAEL LLEKGYEVHG IKRRASSFNT QRIDHLYRDR HDIENEGSPV
SHHSSLFLHY GDLTDSSNLT RIISEVQPDE VYNLGAQSHV AVSFESPEYT ADVDAMGTLR
LLEAIRFLGL EKKSRFYQAS TSELFGLVQE IPQRESTPFY PRSPYAVAKL YAYWITVNYR
EAYGMYACNG ILFNHESSRR GETFVTRKIT RSLANITQGL EECLYVGNMN ALRDWGHAKD
YVRMQWMMLQ QELPRDYVIA TGVQYSVRQF IEKSAAQLGI SIRWEGEGRE EIGVIENLST
PYASLREGSV IVRVDARYFR PAEVETLLGD PAKAKADLGW VPEITLDEMV EEMVAHDLDL
ARRHALLKAN GYIVEVSKES
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