| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0568 |
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| Symbol | |
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| ID | 6461823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 554032 |
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| End bp | 555000 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642726842 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002017497 |
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| Protein GI | 194335703 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000335133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTT GGCTTACTGG TTCGACAGGC TTTCTCGGTA CAAGCCTTGT AAAGCAGCTT
ATCCTTCAGA ATGTCAAGTT TGTTGCCGTT CTATTAGATG AAAAGGATGT CGCACGGTTA
CCGTCTTCAG AGATTGAGTG GGTCATTGTA CCACCGTTGT CTAACTCTGC AAATTATCAA
AATACCCTCA ATGATGTAGA TGTTGTTGTT CATCTCGCAG CTCGTGTGCA TGTGATGCGC
GATGAGGCGG CTGATCCCCT TACTGAATTT CGTCGGGTGA ATGTTTCTGG AACACTTAAT
CTGGCGAAGC AGGCTGCATT GGCTGGTGTT CGGCGTTTTG TGTTTGTAAG TTCGATCAAG
GTTAATGGTG AGTCTACGCT TTTGGGTCAT CCTTTTTCTG ATGGCGATGC GCTTGATCCG
CAGGATCCTT ATGGTATCAG TAAATATGAG GCGGAACAGG GTTTACTTGA GCTTGCATCA
GAAACCTGTA TGGAGGTTGT AATTATTCGA CCACCATTGG TATATGGCCC AGGTGTTAAG
GCAAATTTTG CATCTATGAT GAGCTGGCTT GAACGGGGAG TTCCGCTTCC GTTGGGTGCT
GTTCATAATC AACGTAGTTT TGTGGCGCTT GATAACCTTG TTGATTTAAT TGTAACCTGT
ATTGATCATC CGAAAGCGGT TAATCAGACT TTTCTTGTTT CGGACGGTGA AGATCTCTCC
ACGACAGAGC TGCTGCAGCG GATGGGGCGT GCTCTGGGTA AGCCAGCTCG ATTAATTCCT
GTTCCGGTTG GAGTGATGCA GTTTGCCGCA AACCTGCTCG GGAAGGGTGC TGTTGCCCAA
CGTCTTTTTG GATCGTTACA GGTGGATAGC TCGAAAGCTC GTGATCTTCT TGGTTGGAAG
CCTGTCGTTA CTGTTGATGA AGCGTTACAA AAAACGGCTG ATGCTTTTAA CGCAGTGCAT
AAAAAGTAA
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| Protein sequence | MNVWLTGSTG FLGTSLVKQL ILQNVKFVAV LLDEKDVARL PSSEIEWVIV PPLSNSANYQ
NTLNDVDVVV HLAARVHVMR DEAADPLTEF RRVNVSGTLN LAKQAALAGV RRFVFVSSIK
VNGESTLLGH PFSDGDALDP QDPYGISKYE AEQGLLELAS ETCMEVVIIR PPLVYGPGVK
ANFASMMSWL ERGVPLPLGA VHNQRSFVAL DNLVDLIVTC IDHPKAVNQT FLVSDGEDLS
TTELLQRMGR ALGKPARLIP VPVGVMQFAA NLLGKGAVAQ RLFGSLQVDS SKARDLLGWK
PVVTVDEALQ KTADAFNAVH KK
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