Gene Ppha_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0560 
Symbol 
ID6461842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp547393 
End bp548505 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content46% 
IMG OID642726835 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002017490 
Protein GI194335696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0137413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTG TGGGTACTCG GCCGGAGATT ATCCGTCTCT CCCGGGTGCT GGCGAAGCTG 
GATGAGCATA CGGAGCATGT GCTGGTGCAT ACGGGGCAGA ATTACGATTA TGAGCTGAAC 
CAGATATTTT TTGACGATCT TGATATCCGC AAGCCTGACC ATTTTCTTGA TGCTGCAGGT 
TCTACTGCGG CAGAAACCGT TGGATTGATT ATTGCAAAAG CGGATGTGGT TATGGCCACT 
GTAATGCCTG ATGTGCTGTT GATTCTTGGC GATACTAATT CCTGCCTTGC CGTTTATCCT 
GCCAAACGTC GAAAAATCCC TGTTTTTCAT ATGGAAGCTG GTAATCGCTG TTTTGATTAT 
CGGGTACCTG AGGAGATCAA CCGCAAGATT GTTGACCATA CGGCTGATAT TAATCTGACT 
TACAGCGATA TTGCTCGGGA ATATCTGTTA CGTGAAGGGT TGTTTGCTGA CCGGATTATC 
AAAACCGGAA GCCCGATGTT TGAAGTGCTG ATGCATTACC ATGATAAGAT TGACCGTTCT 
GATGTGCTTG AACGGCTGAG TCTTAGCGAC GGAGAGTACT TTGTGGTAAG TGCCCATCGT 
GAAGAGAACA TCGAATCGGA TCTAAATTTT ATGAAGCTTG TCACCATTCT GAATGGACTT 
GCTGAAAAGT ATGGTAAACG GGTGATTGTT TCAACCCATC CCAGAACCCG CAAACGAATT 
GATGTGAGCG GCGTGGTTTT TAATCCACTT GTTGAGCTGT TGAAGCCGCT CGGTTTTTTG 
GATTATGTTC ATCTGCAGGT GCATGCCAGG GCTGTTCTCT CTGACAGCGG TACCATAACC 
GAGGAGTCAT CGATCCTGAA TTTTCCTGCG CTCAATATCC GTGAAGCACA TGAGCGTCCG 
GAAGGAATGG AAGAAGCATC TGTGATGATG GTAGGTCTTG AGGTTGATCG TGTGATGCAG 
GCGCTCGGGA TTCTTGAGAC TCAGCCAAGA GGTGAGCTCC GTAGTTTGCG CCAAGTTGAG 
GATTATTCAA TGCTGAATGT TTCTGATAAA GTGGTTCGAT TGATACTCAG TTATACAGAT 
TATGTGAATA GGGTGGTGTG GAAAAAGTAT TAA
 
Protein sequence
MTIVGTRPEI IRLSRVLAKL DEHTEHVLVH TGQNYDYELN QIFFDDLDIR KPDHFLDAAG 
STAAETVGLI IAKADVVMAT VMPDVLLILG DTNSCLAVYP AKRRKIPVFH MEAGNRCFDY 
RVPEEINRKI VDHTADINLT YSDIAREYLL REGLFADRII KTGSPMFEVL MHYHDKIDRS 
DVLERLSLSD GEYFVVSAHR EENIESDLNF MKLVTILNGL AEKYGKRVIV STHPRTRKRI 
DVSGVVFNPL VELLKPLGFL DYVHLQVHAR AVLSDSGTIT EESSILNFPA LNIREAHERP 
EGMEEASVMM VGLEVDRVMQ ALGILETQPR GELRSLRQVE DYSMLNVSDK VVRLILSYTD 
YVNRVVWKKY