| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0497 |
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| Symbol | |
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| ID | 6462042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 486311 |
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| End bp | 487054 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726785 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002017440 |
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| Protein GI | 194335646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.196452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA GTAATAAAGA TGATGAAGTC AGAATTAACC GATATCTCGC CTCGTGTGGC
ATAGCCTCAC GCAGGGCTGC CGACCAGCTC GTGCTCGATG GCAGGGTTAT GGTCAACGGC
ACCGTCATTA CCACACCAGG CATCAAGGTA AGCCCCACTC GTGACGAGGT CATTGTAGAC
GGTGAAAAAT TTGCCCAGCC TGAGCACCGC AAGGTCTACA TTCTCTTCAA CAAACCCAGA
AACGTCATCA CCACCAACAG CGACGAAAAA AATCGGGAGA TGGTACTCGA TTTTATTGAT
GTCGAAGAGC GGGTCTTTCC CGTTGGTCGC CTCGACCGGA AAACAACCGG CGTCATCCTG
CTGACCAATG ATGGAACACT GGCCCATAAA TTGATGCACC CTTCATCAAA TGTGAAAAAA
GAGTATATTG CTGAGCTTTC TGAAAAATTC ACGCCAAATC TTCTGCCGCA ACTGACAGGA
GGGATGCGTT TGAAAGATAC CGGGGAAAAG GTCAGTCCCT GCCGCGCAAA AATACTGGAA
GATGGCATGC AGGTACTGGT AAGCATTCAT GAAGGAAAGA ACCACCAGGT CAGAAGAATG
TTTGAAACCC TCGGTTTTGA AGTAAAGCGG CTTGAGCGGG TTGCCTATGC AGGCCTGCTG
GCCGGAGAAC TACGGCGAGG CGAATGGCGA TACCTGAGCC GCAATGAGGT TCAGGCACTC
TACAAATTAA CCGAAAGCCC ATAA
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| Protein sequence | MKKSNKDDEV RINRYLASCG IASRRAADQL VLDGRVMVNG TVITTPGIKV SPTRDEVIVD
GEKFAQPEHR KVYILFNKPR NVITTNSDEK NREMVLDFID VEERVFPVGR LDRKTTGVIL
LTNDGTLAHK LMHPSSNVKK EYIAELSEKF TPNLLPQLTG GMRLKDTGEK VSPCRAKILE
DGMQVLVSIH EGKNHQVRRM FETLGFEVKR LERVAYAGLL AGELRRGEWR YLSRNEVQAL
YKLTESP
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