Gene Ppha_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0492 
Symbol 
ID6462054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp481114 
End bp482127 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content54% 
IMG OID642726780 
Productcobalamin (vitamin B12) biosynthesis CbiM protein 
Protein accessionYP_002017435 
Protein GI194335641 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.267913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATGG CGGATGCGCT TCTTTCGCCG GTTGTCGGGG GGGGATTCTG GATTGTGAGC 
GGAGCGCTGA TCGGTTATTC GGCGAAAAAA ATCACCGAAG AGCGTGATAA CAGTAAAACA 
GCGCTCATGG GTGTGCTCGG CGCTTTTGTT TTTGCTGCGC AGATGATCAA TTTCACGCTT 
CCTGGCACTG GTTCCAGCGG TCACCTGGGC GGCGGGCTTC TCCTTGCTGT CCTGCTCGGC 
CCATACCGGG CATTTATCAC CCTTGCCTCG GTACTCATTA TCCAGTGCCT TTTTTTTGCT 
GACGGGGGGC TGCTTGCGCT TGGCTGCAAT GTGTTCAACC TTGCCTTTTT TCCCTCATTT 
ATTGCTTTTC CTTTTCTGTA TCGGGTTATT GCCGGAAATG CTCCAACTCC GGGGAAACTT 
GCTGTCGGCA GCTTGACGGC TGCAACTGCG GCTCTCCTGA TGGGTGCATT GTCGGTTGTT 
CTGGAGACAC TCTTTTCTGG TATAACCGAG TTACCCTTCG GCACCTTTGT TCTTTTCATG 
CTGCCAGTCC ATCTTGCCAT CGGGGTTGTT GAGGGTCTGG TTACCTGGGG CGTGCTTGCT 
TTTGTTGCCC GAACAGAACC GGGACTGCTT GTTCCGGCAA AAGCGGCTGT TCATCCCCGT 
TTTACCTTTG CACTCTTTGC CATTCTGGCT CTTTTCGTCG GAGGGGTGGG GTCGTGGTTT 
GCCTCTTCGC AACCTGACGG CCTGGAGTGG TCGATTGCGA AGGTATCGGG CTCCAAAGAG 
TTCAGCCCGG CAGGCGGAGC TGTGCATGAG GCGCTTGAAG CTTTTCAGCA GAAGGTTGCC 
TTTCTTCCCG ATTATGGCTT CAAATCTGCC CCGGAATTCC TTGCAAACCC GGAGTCACCG 
GTCGATGCGG GTAGCAGTTT GTCGGGTATT GTGGGCAGCC TTTCGGTTCT TGCTGCTGCC 
GGAACCGTCG GTCTTTTGCT GGGCAGAAAA CAGAAGGGAG AAAAACAGCG GTGA
 
Protein sequence
MHMADALLSP VVGGGFWIVS GALIGYSAKK ITEERDNSKT ALMGVLGAFV FAAQMINFTL 
PGTGSSGHLG GGLLLAVLLG PYRAFITLAS VLIIQCLFFA DGGLLALGCN VFNLAFFPSF 
IAFPFLYRVI AGNAPTPGKL AVGSLTAATA ALLMGALSVV LETLFSGITE LPFGTFVLFM 
LPVHLAIGVV EGLVTWGVLA FVARTEPGLL VPAKAAVHPR FTFALFAILA LFVGGVGSWF 
ASSQPDGLEW SIAKVSGSKE FSPAGGAVHE ALEAFQQKVA FLPDYGFKSA PEFLANPESP 
VDAGSSLSGI VGSLSVLAAA GTVGLLLGRK QKGEKQR