Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0453 |
Symbol | |
ID | 6462174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 440029 |
End bp | 441846 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642726740 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_002017396 |
Protein GI | 194335602 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00199569 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAA CTGCAGACAC TCAACACGGT AACCCTCTGC CACCCGCAGC CAACCTGTTT TTCAAAACCA TTTTTTTGCT CGACGAGGCA CGCAGCGTCG CAACGGGTGA TGGTATTGTA ACATTCGAGC GCGTTTTTTT TTCTCCTGCC CGTTTGACGG CATTCTCCAA AGGGGAATTT GATAAAAAAA TAGATGATGA ATCGAGCATC AAAGAGTCTT ATGAAAACAT GATTCCTGAA GAACAAAAGC TGCATCGCTG TTTTCAGGTG GTCTTCAAGA CTCAGGAATT GCGGAATGCG TTTATCCATA AGTACAAAAA TAATAATGCA TTAGAGTCGG TGACAGAAGA AGTTGAAGTA AAGCTATTTA ACTTCCAGAT ACCTCCCAAC GATACGATGA ACAGTCAGCT TTGGGGGCAT CAAAAAACCA ATGTTGAAGC TGTTTGGGAT TGCTCACGAG GATGTGGTCC GGTCGTTGCC ATTGTAGATA CAGGAATTGA CACAACACAC CCGGAGCTCC AGCATCAATT ATGGGAAGTC TACCCAGGAG TACATGGCAT TAACTTAAAC AATGGCCCTA TATCGGATAT TACAGATTAT CATCCTCTTG GTCATGGTAC TCATGTTGCA GGTATTGTCG CTGCACGTGG AAATAACCTG TATGGCGTTA TCGGCGCAGC ACCTGCCGCC CAGCTCATGG GAATAAGAAT ATATGGTAGT TTGCCAACGG GAAGCGCCAT GGCGGCTAGT GGCATTTACT GGGCAATAGG GCTCGGTGCT GATGTCATTA ACTGTAGTTG GGGGGTTCAG GTACCATTTG ACCCTGTTAT CTCTTTAGCT ATCGGGGCTG CACTTGCTCA GACTCCACCC CCTGTTATTG TAGCTGCCGC AGGAAATGAT GGTGTCGATG CAATAAATTA TTATCCGGCG AGCGACCCGC AAGTCATTTG TGTAGCAGCG ACGGACATAA ACGATGCGCG AGCGATATTT TCCAGTTCGT TATCCTCAAA CTGGGGAAGT GTCGTCGATG TGGCGGCTCC AGGGAAGGAT ATCTGGTCTA CAGTGCCAGT TAGCGTTAAT TCAAGTGGTT TCATGCAACT ATCCGGCACC TCGATGGCGG CTCCTCATGT ATCTGCTATG GTTGCCATTA TCCGTTCGCG TTTGTCCGGG CTTACGCAAC CTGAGTATCT GGAGATAGTA CAGACCTACG TATCCACCAT ATATCCCGAT CGTTACATCG GAACAGGCCG CATTGATTTT ACTTTTTTGA AAGAAATTCT TTGCGGATGT GGCTGCTCAC CCTGCCGTTA TCGTGTAATC CTGGAAGAAC GCCGATTATA TTACGCCAGC ATTCGAAAAA AGTTTACCAT TGCAGGAAAT AGTAATCCCC CTGCATGCAC TCTGCATGAG TGCACAGAAG TAACGATTTC CCCCAGTCTG GAGCCATGCT TTAAACTGCA TTGGGGTGAC TCACCTCAGG ACCAAATTGA AACTCATGAT ACAGAAATCA TCTATATCAC AGCATGCAAC CCCTATTGCA ACATCACTTT TAAAGGTCTG AAGATTATTG CCATACGTAT CATACCAAAT TATGTACTCC CTAATAATGA AATGGCAGTT GAGCTTGCAG CGTCAAGCCT TATTTGCTAT GGCACGTTAG GACCATCAAG GTGTACTACC CGAGAGTATG CGTTGATTAC AAGTGATACA GCCCCCGGCA CTTACAGCCT GGAATTTGAG TACTGTATTG AGGAGATTGA GTATCACGGG TATAACCGGG GAAAAAACAG CTTTACACTT ACTCTGGTCG ATAGCTGA
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Protein sequence | MNATADTQHG NPLPPAANLF FKTIFLLDEA RSVATGDGIV TFERVFFSPA RLTAFSKGEF DKKIDDESSI KESYENMIPE EQKLHRCFQV VFKTQELRNA FIHKYKNNNA LESVTEEVEV KLFNFQIPPN DTMNSQLWGH QKTNVEAVWD CSRGCGPVVA IVDTGIDTTH PELQHQLWEV YPGVHGINLN NGPISDITDY HPLGHGTHVA GIVAARGNNL YGVIGAAPAA QLMGIRIYGS LPTGSAMAAS GIYWAIGLGA DVINCSWGVQ VPFDPVISLA IGAALAQTPP PVIVAAAGND GVDAINYYPA SDPQVICVAA TDINDARAIF SSSLSSNWGS VVDVAAPGKD IWSTVPVSVN SSGFMQLSGT SMAAPHVSAM VAIIRSRLSG LTQPEYLEIV QTYVSTIYPD RYIGTGRIDF TFLKEILCGC GCSPCRYRVI LEERRLYYAS IRKKFTIAGN SNPPACTLHE CTEVTISPSL EPCFKLHWGD SPQDQIETHD TEIIYITACN PYCNITFKGL KIIAIRIIPN YVLPNNEMAV ELAASSLICY GTLGPSRCTT REYALITSDT APGTYSLEFE YCIEEIEYHG YNRGKNSFTL TLVDS
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