Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0451 |
Symbol | cmk |
ID | 6462184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 437251 |
End bp | 437946 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642726738 |
Product | cytidylate kinase |
Protein accession | YP_002017394 |
Protein GI | 194335600 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.001027 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAGG AAACGGGAAA AAAACGTATC ATTATTGCCA TTGACGGTCC GGCTGCATCC GGAAAAAGTA CTACAGCACG CAAGGTCGCG CACCTGCTCG GGTACACCTA TATTGATACC GGCGCCATGT ACCGGAGTGT AACTCTCAAG GCTCTGAAGC AGGGAGTTCT TGATAGCCTG CACCATTCCC CCGAGAGCGT TTCCGGTTTG CTTCACGATA TTGTCATCCA TTTTGAGGGC GACCACGTTT TTCTTGATGG CGAGGATGTC ACTGCCGAAA TCAGATCGAA CCAGGTGAGT CGCGAAGTCA GTTTTATCAG TTCACTCAAA CCGGTACGTG ACCGACTTCG TGAGATGCAG CAGCATCTCG GCCGTCAGCG GGGCGTTGTC ATGGATGGGC GCGACATCGG CACCGTTGTC TTTCCCGATG CAGAGCTGAA AATCTATCTT GTTGCAGACG CCCGCGAAAG GGCCAAAAGG CGCCATGCCG AACTGACGGC AAAGTCTGCC GAAGGTGTTG AGCTGCCAGA TCTTGACTCG CTTGAACAGG AGATAACGAA AAGGGACCGG GATGATGCCG AAAGAGAACA TGCCCCCTTG AAAAAACATC CCGAAGCCTA TGAAATTGAT ACATCAGCAA TGACCATCGA GCGTCAGGTA GAGATGGTCT GCCAACTTGC GCGGGCAAGG GAGTGA
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Protein sequence | MKQETGKKRI IIAIDGPAAS GKSTTARKVA HLLGYTYIDT GAMYRSVTLK ALKQGVLDSL HHSPESVSGL LHDIVIHFEG DHVFLDGEDV TAEIRSNQVS REVSFISSLK PVRDRLREMQ QHLGRQRGVV MDGRDIGTVV FPDAELKIYL VADARERAKR RHAELTAKSA EGVELPDLDS LEQEITKRDR DDAEREHAPL KKHPEAYEID TSAMTIERQV EMVCQLARAR E
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