| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0441 |
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| Symbol | |
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| ID | 6462204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 425231 |
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| End bp | 425773 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642726728 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002017384 |
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| Protein GI | 194335590 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCCC GCGAAGAGCT GTTCAAAGGC CTTGTTGCCG AACATCAGGA GATGGTGGTC
AATACCTGTT ACCGATTTGT TTTTAATCGA GAAGATGCAG AGGATCTTGC TCAGGATGTT
TTTGTTGAGG TGTTTCGCTC TCTTGAGCAG TTTCGTGAAG AGGCAAAACT CTCGACATGG
ATATACCGAA TCGCCGTCAC AAAGTCGCTT GATCACCTGC GTCGCTTGAA GAGGAAAAAG
CGGTTCAGCT CATTGAAAAG AATTATCGGT GTTTCTGATC CCTCTGAAGA GATTGCTGCC
CCCACCACGG ATAATCCTGC CGAAGCTCTG GCAGGAAGCG AGCAGGCAAG AATATTGCAA
AATGCCCTGA ATTCGCTTCC CGACAGTCAA AAAACCGCGT TTCTTCTCAG CAAACAGGAG
GGGTACAGTA ATCAGGAAAT CGCTGATCTC CTTAAAACAT CAGTATCAGC GGTCGAATCC
CTGGTGCACA GGGCAAAAAA AAACCTTCAC GATAAGCTTT ATGCCTACTA TAGCGAACAG
TGA
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| Protein sequence | MRAREELFKG LVAEHQEMVV NTCYRFVFNR EDAEDLAQDV FVEVFRSLEQ FREEAKLSTW
IYRIAVTKSL DHLRRLKRKK RFSSLKRIIG VSDPSEEIAA PTTDNPAEAL AGSEQARILQ
NALNSLPDSQ KTAFLLSKQE GYSNQEIADL LKTSVSAVES LVHRAKKNLH DKLYAYYSEQ
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