| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0422 |
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| Symbol | |
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| ID | 6462266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 404407 |
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| End bp | 406248 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726707 |
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| Product | ABC transporter related |
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| Protein accession | YP_002017365 |
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| Protein GI | 194335571 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.333547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACA GCCCCGGGAG AAGAGCAAGT TTCCGGCCTC AGCAGGATGA GACCCTGCAG
AAAGGGAAAA AACGATCGGT TGACTTCTAC ATTGTTTCTC GCCTTTTAGG GTATATCAAA
CCCTACAGGA CTCTTGTTGC CTGGGCTATC GCCATCACCA TCGCTGGCTC TTTTCTCGGC
CCGCTGCGCC CGTATCTGAC AAAGATCGCC ATTGACGACT ATATCGCCCA TGGCAATCTC
AAGGGACTTA CCGTTATCAG TATTTTTCTT GCAGGCGCCA TTCTTCTTGA TGGCATCAAG
CAGTTTATCA CGACCTGGAT GACCCAGATT ATCGGTCAAA AGGCTGTTTT GGACATCCGA
ATGGATATTT TCAGACACCT GCAGAAGCTT CCGGCACGGT TTTATGACCG AAACCCGATA
GGCCGGCTGA TCACCCGTAC AACCGGTGAT GTGGAATCAC TGAACGAAAT GCTCTCCAGC
GGCATCATCA CCATTCTTGG TGACCTTCTG CAGCTCTTTT TCATCGTGGT ACTGATGGCG
TGGATCGACT GGCAGTTGAC CCTTATCGTT CTCAGTATTC TTCCCCTGAT GATCTGGGCG
ACCATCGCTT TCAAAAACAG GGTAAGAATT GCCTTTCAGG ATGTGCTTAC CCATCAGGCC
CGTCTGAACA CCTTTTTTCA GGAACATCTC ACCGGCATGA GCATCGTCCA GCTTTTTAAC
CGTGAAGAGC GCGAAGGGCG AAAATATGCC TCGATCAATG CCGATCACCG GGATGCCAAC
ATCCGGACAG TCCTCTATTT TTCAATCTAT TATCCACTGA TTGAGACACT CAGCTCTGCC
GCTGCCGGCC TCGTCATCTG GTACAGCGGA GTCCGCCTGC TCAAGGCTGA TCTCTCCATC
GGAGTGGTTA TCTCATTTGT CCAGTATATC TGGCTTTTTT TCCGTCCCTT GCAGCATCTT
TCTGACCGAT TCAACGTTAT TCAGACCGCT ATTGCCAGCT CAGACCGCAT CATCCGTCTC
CTTGATGAAA AGGAAGGAAT AGAAGAGCCT GCAGGAAAGA GGGAGATTGA GTGCTTCAAA
GAGAGCATCG CGTTCAAGAA CGTCTGGTTC GCCTATGAGA GCGAAAACTG GATACTGAAA
GATATCTCCT TTACTATCCG GCATGGAGAA AAAATTGCCA TTGTCGGCGC AACAGGAAGC
GGCAAAACCA CGCTGATCAA TATTCTCTCC CGCCTCTACC CCTTTGCAAA AGGGTCGGTG
AGCATTGACA GTATAGAGCT GTCCGATATA GCTGAACACT CGGTAAGAAA ACTGATTGGT
GTGGTCATGC AGGATGTCTT TCTCTTTTCT GGCACCATAC GCGAAAACCT CGCCTTTGGC
AAACCTGATG TCACAGATGA GGAGATGAGG GAAGCGGCGC GAATTGTCGG TGCTGACCGC
TTTATTGACC AGCTCCCCGG AGGTTACCAG TACAGGGTAC TTGAAAACGG CACTGGCCTC
TCCTCTGGGC AGAAACAGTT GATCGCCTTT GTCCGTGCAC TCCTCTACAA TCCGGAAATC
CTTGTGCTCG ATGAGGCCAC CAGTTCAGTT GACACAGAAA CTGAATCCCT TATTGACGCA
GCAACTGCCC GCCTGATGAG TGAACGCACC TCTATTATTA TTGCTCACCG GCTTTCCACC
GTCCAGAAAG CGGACAGGAT TATTGTCTTG CACAAAGGGG TGATCAGAGA GAGCGGCAAT
CACCAGGAGC TGCTCGCAAA AAGAGGGCTC TACTACAAGC TCTACCTGCT CCAGCACCCC
GAACAAACGC TCCACATCGG GGAGAATGGC GCTCCTGCCT GA
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| Protein sequence | MSNSPGRRAS FRPQQDETLQ KGKKRSVDFY IVSRLLGYIK PYRTLVAWAI AITIAGSFLG
PLRPYLTKIA IDDYIAHGNL KGLTVISIFL AGAILLDGIK QFITTWMTQI IGQKAVLDIR
MDIFRHLQKL PARFYDRNPI GRLITRTTGD VESLNEMLSS GIITILGDLL QLFFIVVLMA
WIDWQLTLIV LSILPLMIWA TIAFKNRVRI AFQDVLTHQA RLNTFFQEHL TGMSIVQLFN
REEREGRKYA SINADHRDAN IRTVLYFSIY YPLIETLSSA AAGLVIWYSG VRLLKADLSI
GVVISFVQYI WLFFRPLQHL SDRFNVIQTA IASSDRIIRL LDEKEGIEEP AGKREIECFK
ESIAFKNVWF AYESENWILK DISFTIRHGE KIAIVGATGS GKTTLINILS RLYPFAKGSV
SIDSIELSDI AEHSVRKLIG VVMQDVFLFS GTIRENLAFG KPDVTDEEMR EAARIVGADR
FIDQLPGGYQ YRVLENGTGL SSGQKQLIAF VRALLYNPEI LVLDEATSSV DTETESLIDA
ATARLMSERT SIIIAHRLST VQKADRIIVL HKGVIRESGN HQELLAKRGL YYKLYLLQHP
EQTLHIGENG APA
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