| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0368 |
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| Symbol | |
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| ID | 6462418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 352233 |
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| End bp | 353240 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642726656 |
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| Product | bacteriochlorophyll c synthase |
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| Protein accession | YP_002017314 |
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| Protein GI | 194335520 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01476] bacteriochlorophyll/chlorophyll synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.259035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTT CCGCAAAACC CGGGTTTACC GATAAAGTAC GAGCACATCT TGAGCTTCTC
GATCCTGTTA CCTGGATCAG TGTTTTTCCC TGTCTTGCCG GAGGAGTCAT GGCGTCAGGA
GCCATGAAGG GTACGCTTCA CGATTATCTG TTGCTTTTCG CTATTTTTTT GATGTTTGGT
CCGCTTGGTA CCGGATTCAG TCAGTCGGTC AATGACTGTT TTGATCTTGA ACTTGACCGG
ATCAATGAGC CAACCCGTCC GATTCCTTCA GGTCGTTTGA GTGAAAAAGA GGGATTATGG
AACAGTATCA TTGCCCTTTT GCTTGCCATG GGACTTGGAA TATTCATGGG AGTGCATATT
GGAGGATATC GTGGCTGGGT TATCGTCTCC TCGATTTTTG CCGCACTTCT TGTCGCCTAC
CTCTATTCCG CTCCACCCTT CAAGCTGAAA AAAAATATTC TCACTTCAGC TCCTGCTGTA
GGCTTTTCCT ATGGTTTTGT CTCGTTTATA TCAGCAAACG CCCTGTTCGG CGATATCCGT
CCGGAAGCGA TCTGGCTTGC CAGTCTGAAC TTTTTCATGG CGGTAGCCTT GATTATCCTC
AATGACTTCA AGTCGGCAGA AGGTGACAAG GATGGTGGGC TCAAGTCACT GACAGTCATG
ATCGGTGCAA AAAAAACGTT TCTGGTCTCT TTTATTATTA TTGACCTTGT TTTTTCTGTT
CTTGCTTACC TCTCGTATTC ATGGGGGTTT ATGATTCCCG CGTTTTTTGT TCTGATTGGC
CTTGTTTTGA ATCTGGTTCT TCAGGTTCAG CTTTTGCGAG ATCCGAAGGG TGGAATTTCG
TTCTTGCAGG GAGCCGTTGA TGATGGATTC GGCAATGCAA TCGGCAAGAG TGATATTCAG
GAACACAACA CCTTTCTCCG GTTTCAGGTT GCCAATAACA TTCTCTTTTT ACTCAACAAT
CTGCTTGTTG CCGGTATGGT TGGATTGAAG TATATCACTG TTCAATAA
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| Protein sequence | MAVSAKPGFT DKVRAHLELL DPVTWISVFP CLAGGVMASG AMKGTLHDYL LLFAIFLMFG
PLGTGFSQSV NDCFDLELDR INEPTRPIPS GRLSEKEGLW NSIIALLLAM GLGIFMGVHI
GGYRGWVIVS SIFAALLVAY LYSAPPFKLK KNILTSAPAV GFSYGFVSFI SANALFGDIR
PEAIWLASLN FFMAVALIIL NDFKSAEGDK DGGLKSLTVM IGAKKTFLVS FIIIDLVFSV
LAYLSYSWGF MIPAFFVLIG LVLNLVLQVQ LLRDPKGGIS FLQGAVDDGF GNAIGKSDIQ
EHNTFLRFQV ANNILFLLNN LLVAGMVGLK YITVQ
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