Gene Ppha_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0261 
Symbol 
ID6462328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp256608 
End bp257066 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content51% 
IMG OID642726555 
ProductHipA domain protein 
Protein accessionYP_002017214 
Protein GI194335420 
COG category[R] General function prediction only 
COG ID[COG3550] Uncharacterized protein related to capsule biosynthesis enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGC TTCACCATAC CGATACCGAC GATGCCAGTT ATCTGGAGCT GGCAGAATTT 
CTCTCCACCT ACGGTGAAGC TGATCACATC GCACGTAACC TCGAAGAGCT GTTCACAAGA
GTGGTGTTCA ACATCGCCAC GGCAAACCGC GATGACCATC TTCGCAATCA CGGCTTCATA
CGCTCCCCTT CAGGATGGCG ACTGGCACCA GCTTTCGACA TGAATCCTTC GTTCAGAAAA
GCAGAGCATG TGCTGTCACT TGATCTCTAT AACCGTCAGC CTGATTTTCA GGTTGCGATT
GCGACTGCCG AATATTACCG AATGAATCGC GCTCGTGCCG GGATAATTGT CCGTGAAGTG
TGCGAGGTTG TTAAAGAGTG GAAAGTTCTT GCGAGACGTC TTGGGTTGAG CGGGCAGGAG
TGCTCGGAGG CAGAACATTT GTTTTGTTGC AGGAGATGA
 
Protein sequence
MTMLHHTDTD DASYLELAEF LSTYGEADHI ARNLEELFTR VVFNIATANR DDHLRNHGFI 
RSPSGWRLAP AFDMNPSFRK AEHVLSLDLY NRQPDFQVAI ATAEYYRMNR ARAGIIVREV
CEVVKEWKVL ARRLGLSGQE CSEAEHLFCC RR