Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0205 |
Symbol | |
ID | 6462437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 200775 |
End bp | 201677 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642726500 |
Product | periplasmic solute binding protein |
Protein accession | YP_002017159 |
Protein GI | 194335365 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.767408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAGGT TTGTGATAAA ATGTATTGCG GTGCTGCCCC TTTTGCTTTT TTTTGCAGGA TGCGTTCAGC CTGCAAGGAG AGGGAAGTTA CAGGTTGTTG CTTCTATTGC ACCCCTCTCC TACTTTGCAG AAAGGATCGG AGGCAGCCAT GTTTCCGTTT CAGTAATGGT ACCGCCGGGC GGAAACCCTC ACAGTTATGA GCCTGCTCCC CGGCAAATGG TTAAACTCGG CGAGGCAACC CTTTTCATCA AGGCGGGTTC CGGGGTTGAG TTTGAGCTGG ATTGGATGGA TCGTTTTTTG TCGATCAACA GGGAGCTGAG GGTTTGTAAT GGAGCAGAGG GTGTTCGCCT GATTCCGATA AAGCATCATG ATGAACAAGA GACACATCAT CACGAACAAG ATGCACATCA TCACGAAGGT TACGATCCTC ATTACTGGCT CTCACCTGCA AACGGGGTGA TTATTGCCCG AAATATCGAA AAAGCTCTTG TTTTGGCAGA TCCGGCGCAC AGGGATGATT ATGCCGTGAA CTGCAGTAAG CTTGTTGCGG AGCTGCAGGC GCTCGACAGG GAGATTCGAC AGAAGGTTGC CAGCTTAAAG AGCAGGCGTT TTCTGGTTTT CCATCCGGCG TGGGGGTACT ACGCCGAAGC ATACCAGTTT GAACAGATCG CAGTTGAGGA GGAGGGCAAA ACGCTTACTC CAGGGCAGAT GCAGCGAGTT ATTGAAAAAG CCAAAGCGAA CCATATCAAG GTGGTTTTTG TCTCTCCCCA GTTTAATATT TCCCAGGCGA AAACCATTGC TGCAGAAATT GGTGGGGTAA CCCGCAGTGT TGATCCCCTC GCTGCTGATT ATCAGGAAAA TCTCCGAAGT GCGACACAGG CGTTTAGCGA AAGCTTGCCA TGA
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Protein sequence | MVRFVIKCIA VLPLLLFFAG CVQPARRGKL QVVASIAPLS YFAERIGGSH VSVSVMVPPG GNPHSYEPAP RQMVKLGEAT LFIKAGSGVE FELDWMDRFL SINRELRVCN GAEGVRLIPI KHHDEQETHH HEQDAHHHEG YDPHYWLSPA NGVIIARNIE KALVLADPAH RDDYAVNCSK LVAELQALDR EIRQKVASLK SRRFLVFHPA WGYYAEAYQF EQIAVEEEGK TLTPGQMQRV IEKAKANHIK VVFVSPQFNI SQAKTIAAEI GGVTRSVDPL AADYQENLRS ATQAFSESLP
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