| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0191 |
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| Symbol | |
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| ID | 6462574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 186123 |
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| End bp | 190157 |
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| Gene Length | 4035 bp |
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| Protein Length | 1344 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642726485 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002017145 |
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| Protein GI | 194335351 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAATA AATTAACAAC CGGACGAATT CTTATAGTAT TTATTATTGC TTTTGCTCTA
ATTAAAACGT ATTGGCATGT GTTTGTTTTT ATGAGCATTT CCGCTATCGT AATCTGGAGC
ATTATTAAAG CAATTAAAAA GATCCAATAT TCTCAATCTT TACATTTGCA TGCGCAAAAT
CATATAAACG ATTCCAAGTC CTATCCAAAT CAAGGCGAAA TCATCATTTC TAATACCACG
AAATCACATA AAGAAATAAA AGATTTAACA TCTATCCGAT GCAAAGCTGA AGATGGTGAT
GCGCAAGCTG AATATGAGCT TGGCATGATA TATGACTGCG GCTATTTTGC TAATGGCCAA
GGTATTCCAC AAGATAACAC CGAGGCTGTA AAATGGTACC GTTTAGCTGC CAATCATGGG
CACCCTACAG CGCAATATAA TCTTGGCTGG ATGTATTATG CCGGTGCTGG CGTGGAACAG
GATTATGATG AAGCATTACG ATTAACCCAA CTGGCTTCGG AAAATGGTAT GCCCAATACT
CAGGCACGTT TCGACCTAAT AAAGAAGGCA AAAGATGACT ATATAGAGGA GGAGCAATGG
AATCTGCTTA CTAAAAAACA AGTCCATTCA GCAACCCTAT TACCGAGTAT TAAGTATGAG
ACTGATATAA ATATTATAGC AGATAAAAAT AAAATCACAC AATCCAGCAA AGCGATTACA
GCAAAATATG GTACAAAAGA ACTTACAACG CCGCTTACTG AGAACAAATT TGAGACTCTA
ATCAAAACAG AAAAATCAAC TCCAGCCAAA TTAAAATCAA CAATAGATGC AGAAATTTTA
GTACAGACAC AAAACACAAA GGAAATTGCA GCAATAAAGT TACAGATAGC AACACTGCTT
AAAGAAACAA TAAGATCTTA TATGCAGTCA ATTTTCAGCA CAATGCGTTT TAAAGAAATG
CAAACGGTGT CTCAGGATTC ACCCAATCAA GGTTATGCAC CTACACCGTC AGAAAATACA
ACAAAATCCC CAGAAACAAC AGGGATAGTA AATACCAGTG CAGATAAACT CGATGCGTAT
AGACGCTTTA TTAATAATAA TTCTATTGAT GCTTCATCAA ATCTACCTTC ATCATTTTTA
AAAAATAATA TTGAACAAGA ATTAATAAAA TTGGAGCATT GGTTTGAAAG AATAATTACT
TTTGATGCTC CGATTTTAGT CTCTTTTGCT TCATTGTTAT GGCATATGTC AATAAAAAAA
TTGACTATTA GTGAAAAAGA GGCAATAGAT ATTGCAAATC TTCTTGAATC AATAAATATA
GGGATCGAAC CCGATTCTCG CTTCAGCGAC TTTATCCCGA ATCCAGAGCA CAACGTAGTT
CTTTTCAGAA TCAGCGAAAA TACTCCAAAG CTCCCTTCAT CGGAATACTC CGTTGCTACA
CTCAGCCTCC ATTTAGCCTC GGCCTTTGCC CTTACTGAAA CAACTGTACA CATCAGCGAA
AAACAAAATT GGAAGCAACT GCTTGAAATT TTGCCGCACC TCTCTTCAGA TGAAATAATC
AGACTACAGG CTCATACATT GTTTATAAAG ACTTCCGCTC AGACCTTCAG CATTAATGAT
ATCAAAAAAA ACATAGCGAT AATCGATCAA AGTCAAAAAG AATCACTATG GAAATTCCTT
GTTGGCATCG CAAAGTTAAA CGGATGCACT GACATAACTA AAATAAAAAA TTTTACTCGA
CTATATACAA TGCTGGGTCT TGATGCACTG ACTATTCCCA GTCATACGCA TGAAATTGCT
GTAGAACCTA TAGCAATTCA AACCACTGAT TTTTTGCCAT CTTCAGGGTA TTCAATCCCC
GCTCAGCAAA TAATAGCGGA AGGCATTTCT CTTGAGATGA ATGAAAACGA AGCAACCCAT
ACAGTGGCCA ATGCCATCTC CTCAAAATCT TTAACAAAAA AGATAATATC TACAGATGAA
TTATGGGTTC CCTTTGGAAA AGCTATTGAA CATTCTGGGT ATACAATTCC TGACGGTCTT
CTTTATTTTG GGACTGCTTT AAAATCTATT ACAAAGTCAC AAGAAGAACC ATCTCTTATT
GACATCTCTC TGCCAGTTGA AAAGGCAAAT TCTGATATTA ATAGTAATAA TATGAGGTAT
TGGCCAAATT ACTCACAAAT ACACGCCACA CATCGAGCAG CATATCTCGA CTGGCTCTCC
ACAGGAAGGA AAGAACCAAT GGCAAATATT GGTTACGTTT TTCTTTTCTT TTATGGCTTG
GAGAGACGGG TTTTGCTTGA TAATGCTTTT TCAGCAGTTG ACGATTTACC AGTCATTATC
GAAGAAGTTC AACGACTTCT GACTGTATAT AAAAACAATG CTTCATTTCG TCAGTACGCC
AATAATTTTC TGGATATTTT GCAGATTATT CGAGGGGGAG TTTCTTTTTA TCAGACTGAA
CCATCGCTTG AGTCATACTC TTGGAAACAG CCCTTAATCT TTAAGGTTGC ACTTGGACAA
ATGGCTGCCG ATAAGGTTCC ACTCCCTGCA GAGTGGGCTT TAGCATGGGT AATAAATGAT
CCATCAATTC AAAAAAAAAC GCCTGTTAAA CGTTGCAAGC TTGAATTTCT TGACCTGTTC
AAACTTCAGT ATACCGAAAA GTTTAACGCG GGTATGCTGT TAATACCAAA TAAAAAAAAG
CTCCATGCGA CATATCACCC TGCCAGTCCT CTGTTTGATA AAGATGTCAC AATCCCGATT
GCGGATCTTC CTGATGTGAC TAATGTTTCT GAGGAATCAG AAAAAATAAG AGATCTCGTA
AATGAATGTA CTGATAAACT TGAAGATTAT AGCCGCTTTC TTGGGCGTAA TCCGGATAGC
AATAATTCTC TTGAAGCGAT GTCGCTTCTA CCTAAACTCC TTGTAAAAAA ATATGTAGCA
ACAAAATTTC AAAAACTGAC AACCTGGCTG GAACAGCAAA GTCTTTCTGA TACTCCAGTG
CAGGTCTCTT TTCAATCAAT TTTAGAACTA ATACCACCAA TAAATCAGAA CTGTTTTGGC
AAGACAGAAG TGATAACCGT TGCCAATTTT CTTGGCAAGA TAAACTTTGG TATTGAGCCT
GACCCTCGCT TCGGCAACTT TTTCTCCAAA CAAGAAAACA ATATCGTTCT TTTCAAAATC
AGTGATAATG CGCCTAATAT ACCCTCTGCT GAGTATTCTG CTTCAACTCT TGTTCTCCAT
TTGGCCTCTG CCGTTGCCAC TTCTGATGGT ACTGTGAATA TAAGCGAAAA GCAACAGTTG
GAGAAACATC TTGAAGTTTG CTTACACCTC TCTTCAGATG AGAAAACAAG ACTGAAGGCT
CATTTATTAT TCCTTCTTTC TTCCTTCCCT GGCATTAATA ATGTCAAGAA AAGAATAGAG
TTACTTAAAC AGGAACAGAG AGAATCACTT GGGAAATTTC TTGTTTGTAT TGCTCAGGCG
GACGGCTATA TTGACGTAAT GGAAATAAAA ATTCTTACGC AGATATATGC CATGCTTGGT
CTTGATGCAC AGAGTCTTTA CAGTCAGGCC CATACTGCGG CTATCGAACC TGTCGTCGTT
AAGACTTCGG ATTTCGAGAC TTTACCAGAG TATTCAATCT CTGCTTCACC AAAAATATCT
AATGGTATTT CTCTTGATAT GGACAAAATA AAAACAATCC ATGCAGAGAC CAATACTATA
TCCTCAATTC TGAATGATAT TTTCTCTGAA AATGAACATG AGCAGATAAC AACATTAATG
TCGGAAGCAA GGAGAACAGA CGTTCCCATT ACTGGACTTG ATCCTAAATC ATTTGCATTT
ATGAAAGAGC TCGCGTGCAA GCTCATGTGG ACGAGAGTCG AACTGGAAAA ACTTGCAGCC
GACCACAGCT TGATGCTGGA TGGAACACTC GAAAGCATAA ACGACGCATC ATTTGATCAC
TTTGGAGATA TGTTCTTTGA AGGTGATGAC CCAATAATTA TCAACGCACA ATTTGCCAAG
GAGATCAATG TATGA
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| Protein sequence | MGNKLTTGRI LIVFIIAFAL IKTYWHVFVF MSISAIVIWS IIKAIKKIQY SQSLHLHAQN
HINDSKSYPN QGEIIISNTT KSHKEIKDLT SIRCKAEDGD AQAEYELGMI YDCGYFANGQ
GIPQDNTEAV KWYRLAANHG HPTAQYNLGW MYYAGAGVEQ DYDEALRLTQ LASENGMPNT
QARFDLIKKA KDDYIEEEQW NLLTKKQVHS ATLLPSIKYE TDINIIADKN KITQSSKAIT
AKYGTKELTT PLTENKFETL IKTEKSTPAK LKSTIDAEIL VQTQNTKEIA AIKLQIATLL
KETIRSYMQS IFSTMRFKEM QTVSQDSPNQ GYAPTPSENT TKSPETTGIV NTSADKLDAY
RRFINNNSID ASSNLPSSFL KNNIEQELIK LEHWFERIIT FDAPILVSFA SLLWHMSIKK
LTISEKEAID IANLLESINI GIEPDSRFSD FIPNPEHNVV LFRISENTPK LPSSEYSVAT
LSLHLASAFA LTETTVHISE KQNWKQLLEI LPHLSSDEII RLQAHTLFIK TSAQTFSIND
IKKNIAIIDQ SQKESLWKFL VGIAKLNGCT DITKIKNFTR LYTMLGLDAL TIPSHTHEIA
VEPIAIQTTD FLPSSGYSIP AQQIIAEGIS LEMNENEATH TVANAISSKS LTKKIISTDE
LWVPFGKAIE HSGYTIPDGL LYFGTALKSI TKSQEEPSLI DISLPVEKAN SDINSNNMRY
WPNYSQIHAT HRAAYLDWLS TGRKEPMANI GYVFLFFYGL ERRVLLDNAF SAVDDLPVII
EEVQRLLTVY KNNASFRQYA NNFLDILQII RGGVSFYQTE PSLESYSWKQ PLIFKVALGQ
MAADKVPLPA EWALAWVIND PSIQKKTPVK RCKLEFLDLF KLQYTEKFNA GMLLIPNKKK
LHATYHPASP LFDKDVTIPI ADLPDVTNVS EESEKIRDLV NECTDKLEDY SRFLGRNPDS
NNSLEAMSLL PKLLVKKYVA TKFQKLTTWL EQQSLSDTPV QVSFQSILEL IPPINQNCFG
KTEVITVANF LGKINFGIEP DPRFGNFFSK QENNIVLFKI SDNAPNIPSA EYSASTLVLH
LASAVATSDG TVNISEKQQL EKHLEVCLHL SSDEKTRLKA HLLFLLSSFP GINNVKKRIE
LLKQEQRESL GKFLVCIAQA DGYIDVMEIK ILTQIYAMLG LDAQSLYSQA HTAAIEPVVV
KTSDFETLPE YSISASPKIS NGISLDMDKI KTIHAETNTI SSILNDIFSE NEHEQITTLM
SEARRTDVPI TGLDPKSFAF MKELACKLMW TRVELEKLAA DHSLMLDGTL ESINDASFDH
FGDMFFEGDD PIIINAQFAK EINV
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