Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0179 |
Symbol | |
ID | 6462296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 175893 |
End bp | 177341 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642726474 |
Product | glycine dehydrogenase subunit 2 |
Protein accession | YP_002017134 |
Protein GI | 194335340 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.505753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAA AACTGATTTT TGAACTTTCC CGCAAAGGGC GCAAAGGATA CAGCCTCTCC GGAAACGAGT TACCGGAACA GCCGCTGGAG AACATCATCC CTTCAAAATA TCTGCGCACG ACACCTGCTG AGCTTCCCGA AGTGGCCGAA AGCGAGGTTG TGCGTCACTT TGTGCGTCTC TCGAACCTGA ACTACCACGT TGACAAGAAC ATGTACCCGC TGGGAAGCTG TACGATGAAG TACAATCCCA AGATCAATGA TTATACCTGT GACCTTCCGG GGTTCAGCGC CCTCCATCCC CTGCAGCCTG GCGAAACAAC ACAGGGTGCA TTGCAGCTCA TGTTTGAACT GGCCGAGATG CTGCGCGAAA TTGCCGGTAT GGCGGCTGTT ACGCTGCAAC CAGCGGCTGG CGCCCACGGG GAGCTGACCG GCATTCTGCT TATCAAGAAA TACCATGAGT CGATTGGCTC AAAACGGCAC AAGCTGCTTG TGGTCGATTC GGCACACGGC ACCAACCCTG CCTCAGCCGC TCTGGCCGGG TACGATATTA TCTCCGTCAA AGGCAATGCC GACGGACGCA CCGATCTGGA TGACCTTCGA AGCAAGCTTG ACGGTGATGT GGCCGCACTG ATGCTGACCA ACCCTAACAC CATCGGACTC TTTGAAACAG AGATCCTCGC TATCTCCAAA ATGGTGCACG ACAACGGCAG CCTGCTCTAT ATGGATGGCG CAAACATGAA TGCCCTGCTC GGCATAACCC GTCCTGGCGA CATGGGCTTC GATGTAGTCC ATTACAACCT GCACAAAACC TTTGCTGCAC CGCACGGCGG CGGCGGCCCC GGAAGCGGCC CGGTCGGCGT CAGCGAAAAG CTTATTCCCT TCCTGCTGGT ACCGGTTATT GTAAAAGAGG GAACAACCTA CAAGCTCTCC TACGACCGTC CGGAAAGCAT CGGCAGAATG ATGAATTTCT ATGGGAACTT CGCCGTGCTG GTCAGGGCAT ACACCTACAT CCGGATGCTC GGCCCCGACG GGTTGCGACG GGTTTCGGAA AATGCCATTA TCAATGCCAA CTACCTGCTG AGTCTGCTGC TTGAGAGTTA CGACCTGCCC TACCCGAAAC CGGTGATGCA CGAGTTCTGC CTTTCGGGCG ATCGACAGAA AAAGGCGCAC GGCGTCAAAA CGCTCGATAT TGCAAAAAGG CTGCTCGACT ACGGCTTTCA TGCCCCGACC ATCTACTTCC CGCTCATTGT CAGCGAAGCG CTGATGATTG AGCCGACGGA GACGGAATCA AAAGAGACGC TCGATGTATT TGCCCAGGCG CTGCTCAGCA TTGCCGATGA GGCCGCAAAC AATCCGGCTC TGGTAACCTC AGCCCCGGTA ACAACACCGG TCAAGCGGCT TGATGATGCT ATGGCCTCAA GGCAGTTAAA CATCTGCTGC TCACTCTGA
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Protein sequence | MREKLIFELS RKGRKGYSLS GNELPEQPLE NIIPSKYLRT TPAELPEVAE SEVVRHFVRL SNLNYHVDKN MYPLGSCTMK YNPKINDYTC DLPGFSALHP LQPGETTQGA LQLMFELAEM LREIAGMAAV TLQPAAGAHG ELTGILLIKK YHESIGSKRH KLLVVDSAHG TNPASAALAG YDIISVKGNA DGRTDLDDLR SKLDGDVAAL MLTNPNTIGL FETEILAISK MVHDNGSLLY MDGANMNALL GITRPGDMGF DVVHYNLHKT FAAPHGGGGP GSGPVGVSEK LIPFLLVPVI VKEGTTYKLS YDRPESIGRM MNFYGNFAVL VRAYTYIRML GPDGLRRVSE NAIINANYLL SLLLESYDLP YPKPVMHEFC LSGDRQKKAH GVKTLDIAKR LLDYGFHAPT IYFPLIVSEA LMIEPTETES KETLDVFAQA LLSIADEAAN NPALVTSAPV TTPVKRLDDA MASRQLNICC SL
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