| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0121 |
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| Symbol | |
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| ID | 6462466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 134281 |
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| End bp | 135690 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642726431 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002017091 |
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| Protein GI | 194335297 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTA AACTGCTGAT TCCTTTATGC CTGGCAGCAA CCACCCTGAC GGCCTGTTCG
CTTGCGCCAA CCTATGTTCG CCCAACGGCA CCCGTCACCA AGGAGTGGCC GGTTGCTTCC
GCTGCACCGC AATCCGTGGA AGAGTCGCAT ACCGCCGATA TCGGATGGCG GAGCATGTTC
AGGTCGCCAA AACTGCAAAG CCTTATCGAA GCATCCCTTG CCAACAACCG CGACCTGAGA
ATAGCCGCCC TCAACATCGA AGCGGCCCGC CACACCTGGC GCATCCAGCG TTCGGATCTC
CTGCCATCGA TCAATTCCTC GGGAAACTAC ACCCGACAGC AGTTGTCAAC AAGCATGAGC
GGCACCGGAA AAACGGAAAT CACATCAACA TATAGCGCTG GCATCGGCAC GACGGCTTAT
GAACTTGATC TTTTCGGTCG TGTACGCAGT CTCAGTAATC GCGCCATCAA CCAGTATCTC
GCTACCGAAG AGGGGCGCAA AGCCGCCCAG ACAAGCCTGG TCGCTGAAGT TGCCAACGCC
TATCTCACCT ATCTTGCCGA TGTTGAACTG CTGCGACTGA CTGAAAGCAC GCTCAAAACA
AGGCAGGATG CCTGCGATCT CATCAAACGC AGCTTCGATC TCGGGGCAAA GTCACGACTC
GATGTGGCAC AGTCCGCAAC ACTGGTCGAA TCGGCCCGGG CCAGCCGTGC GCAATATCAA
CGTCATGTGG AACAGGACAA GAACGCCCTG ACCCTGCTGG TCGGAAAGGA GATCGATCCG
ACGCTCCTCG AACCCCAACC CCTGGCCGAT GTTGAGGTGA TGGAGAGACT CCCCGTCGGC
ATTCCCTCCG TCGTCCTGCT CGATCGACCG GACGTACGGC AGGCGGAATA CGCACTGAAG
GCAGAAAATG CCAACATCGG AGCCGCACGG GCCTCATTCT TCCCCAGCAT AAGCCTTACC
GGTTCCGCCG GATTCGCCAG CGCCAGCTTG TCGGATCTCT TCGAAGCCGG GTCGAGCGGT
GTCTGGAGCT TCGCCCCACA GGTAACGCTC CCGATCTTCC AGGGAGGCCG GTTGCGCTCC
AACCTCAAAC TGGCTGAAAC AAACAGGGAT ATTGCCGTCA CCCGATATGA AAAAGCTATC
CAGAGTGCCT TCCGGGAGGT CGCCGATGCA CTGGTCGCCC GTGCTACCTA CACCGAACAA
TTGCAGGCCC AGCAAGCTCT GGTCAAAGAG AGCGATCAAG CCTGCACCAT CACAAAAGCG
CGTTACGACC ATGGCATCGA CAGCTCTTTC GCCCTGCTTG ACGCCCAACG CTCCCTCTTC
GAGGCTCAGC AGAACGAAAT CCTGATCCAT CAACAGACTC TTGCCAACCT GATCGACCTC
TACAAAGCCC TTGGGGGCGG GTGGCAATAA
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| Protein sequence | MNTKLLIPLC LAATTLTACS LAPTYVRPTA PVTKEWPVAS AAPQSVEESH TADIGWRSMF
RSPKLQSLIE ASLANNRDLR IAALNIEAAR HTWRIQRSDL LPSINSSGNY TRQQLSTSMS
GTGKTEITST YSAGIGTTAY ELDLFGRVRS LSNRAINQYL ATEEGRKAAQ TSLVAEVANA
YLTYLADVEL LRLTESTLKT RQDACDLIKR SFDLGAKSRL DVAQSATLVE SARASRAQYQ
RHVEQDKNAL TLLVGKEIDP TLLEPQPLAD VEVMERLPVG IPSVVLLDRP DVRQAEYALK
AENANIGAAR ASFFPSISLT GSAGFASASL SDLFEAGSSG VWSFAPQVTL PIFQGGRLRS
NLKLAETNRD IAVTRYEKAI QSAFREVADA LVARATYTEQ LQAQQALVKE SDQACTITKA
RYDHGIDSSF ALLDAQRSLF EAQQNEILIH QQTLANLIDL YKALGGGWQ
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