Gene Ppha_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0089 
Symbol 
ID6462068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp94003 
End bp95277 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content52% 
IMG OID642726392 
Producthypothetical protein 
Protein accessionYP_002017062 
Protein GI194335268 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.200818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAAA TTATACCTTT TAACGGGATT CTTTATAGTC CCGAACTGCT GAAAAGCGCA 
TCAGAGTTGA TTTGCCCTCC TTATGATGTC ATTTCGGCAG CTTTTCAGCA GCGCCTCTAC
GGCAGCTCAC CCTACAACGC CATACGTCTT GAACTGCCAC TCGAGGCCGA TCCCTACAGC
GCAGCCGCAG AGCGTCTCGC TGAGTGGCTT CAGGGTGGTG AACTGCAGAA CGATTCCGTT
CCGGCCATTT ATCCCTATTT TCAGACTTTT GAGGATTCCG ACGGCGTTTC GCATACCCGC
TGCGGTTTTT TTGCCGCCAT GCGCCTGTAT GATTTTTCGG AAAAGAAGGT ACTGCCTCAC
GAAAAAACCC TTTCAGGTCC CAAGGCCGAT CGGCTCAACC TCTTCAGAAA AACGAAGACC
AACATCAGCG GCATATTCGG TCTCTATGCC GATGAAAGCA AAACTGCGGA TTGCCTGATG
AAAGCTTTCA CCGAGAGCCA TGAGCCGATT GTTGATGCAC ATTTCGAGGG AGTGAGCAAC
CGGCTGTGGC GCATCACTGA TCCGGAGATT GTCGGCCAGT TCCAGCAGTC GCTGCAGGAT
CGAGCGGTCT ATATTGCTGA TGGCCATCAC CGTTATGATA CCGGCGTCAA CTATCGCAAT
GAGCGTGCGG CAGCGAACCC TTCTCATACC GGCCAGGAGC CCTATAACTT TATTTTGACC
TATCTGGCCA ACATTCATGA CGAAGGGCTG CTGATTTTCC CGATCCATCG CCTTGTGCAC
AGCCTCGAAG GGTTCGATGC CGCTTTGCTG AAGTCGCGTC TTGCAGAGTT TTTTACCGTA
ACCGAACTGC ATGACAGAGC CGCACTGAAG GCATTTCTTG ATGGAGAGCC ATCGAGTTAT
GCTTACGGCG TTGTCACTTC CGGCATGGTT CTTGGTATTT GCCTGAAAAC CGATCCAAAG
CCCCTGCTTG ATCCTGCCCG TCCGGAAGCT CTGCAACGCC TCGGTCTGGT GCTTCTGCAC
GATCTTATCT TGTTCAGATT GCTTGGCATC TCCCAGGAGG CGATGGCAAA GCAGAGTAAC
CTGACGTATG TCAAGGATGA CCGTGAAGTG TTCGACGCGA TTGATTCCGG TAAGGTTCAG
GTTGGATTTG TGGTCAAGCC AACGACCGTT GAGCAGGTTC TTTCCGTATC GGAGACGGGA
GAGGTGATGC CGCAGAAATC GACCTTCTTT TACCCGAAAC TGATGACCGG TATGCTTTTT
AACCCGCTTG ACTGA
 
Protein sequence
MPEIIPFNGI LYSPELLKSA SELICPPYDV ISAAFQQRLY GSSPYNAIRL ELPLEADPYS 
AAAERLAEWL QGGELQNDSV PAIYPYFQTF EDSDGVSHTR CGFFAAMRLY DFSEKKVLPH
EKTLSGPKAD RLNLFRKTKT NISGIFGLYA DESKTADCLM KAFTESHEPI VDAHFEGVSN
RLWRITDPEI VGQFQQSLQD RAVYIADGHH RYDTGVNYRN ERAAANPSHT GQEPYNFILT
YLANIHDEGL LIFPIHRLVH SLEGFDAALL KSRLAEFFTV TELHDRAALK AFLDGEPSSY
AYGVVTSGMV LGICLKTDPK PLLDPARPEA LQRLGLVLLH DLILFRLLGI SQEAMAKQSN
LTYVKDDREV FDAIDSGKVQ VGFVVKPTTV EQVLSVSETG EVMPQKSTFF YPKLMTGMLF
NPLD