Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0089 |
Symbol | |
ID | 6462068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 94003 |
End bp | 95277 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642726392 |
Product | hypothetical protein |
Protein accession | YP_002017062 |
Protein GI | 194335268 |
COG category | [S] Function unknown |
COG ID | [COG4198] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.200818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAAA TTATACCTTT TAACGGGATT CTTTATAGTC CCGAACTGCT GAAAAGCGCA TCAGAGTTGA TTTGCCCTCC TTATGATGTC ATTTCGGCAG CTTTTCAGCA GCGCCTCTAC GGCAGCTCAC CCTACAACGC CATACGTCTT GAACTGCCAC TCGAGGCCGA TCCCTACAGC GCAGCCGCAG AGCGTCTCGC TGAGTGGCTT CAGGGTGGTG AACTGCAGAA CGATTCCGTT CCGGCCATTT ATCCCTATTT TCAGACTTTT GAGGATTCCG ACGGCGTTTC GCATACCCGC TGCGGTTTTT TTGCCGCCAT GCGCCTGTAT GATTTTTCGG AAAAGAAGGT ACTGCCTCAC GAAAAAACCC TTTCAGGTCC CAAGGCCGAT CGGCTCAACC TCTTCAGAAA AACGAAGACC AACATCAGCG GCATATTCGG TCTCTATGCC GATGAAAGCA AAACTGCGGA TTGCCTGATG AAAGCTTTCA CCGAGAGCCA TGAGCCGATT GTTGATGCAC ATTTCGAGGG AGTGAGCAAC CGGCTGTGGC GCATCACTGA TCCGGAGATT GTCGGCCAGT TCCAGCAGTC GCTGCAGGAT CGAGCGGTCT ATATTGCTGA TGGCCATCAC CGTTATGATA CCGGCGTCAA CTATCGCAAT GAGCGTGCGG CAGCGAACCC TTCTCATACC GGCCAGGAGC CCTATAACTT TATTTTGACC TATCTGGCCA ACATTCATGA CGAAGGGCTG CTGATTTTCC CGATCCATCG CCTTGTGCAC AGCCTCGAAG GGTTCGATGC CGCTTTGCTG AAGTCGCGTC TTGCAGAGTT TTTTACCGTA ACCGAACTGC ATGACAGAGC CGCACTGAAG GCATTTCTTG ATGGAGAGCC ATCGAGTTAT GCTTACGGCG TTGTCACTTC CGGCATGGTT CTTGGTATTT GCCTGAAAAC CGATCCAAAG CCCCTGCTTG ATCCTGCCCG TCCGGAAGCT CTGCAACGCC TCGGTCTGGT GCTTCTGCAC GATCTTATCT TGTTCAGATT GCTTGGCATC TCCCAGGAGG CGATGGCAAA GCAGAGTAAC CTGACGTATG TCAAGGATGA CCGTGAAGTG TTCGACGCGA TTGATTCCGG TAAGGTTCAG GTTGGATTTG TGGTCAAGCC AACGACCGTT GAGCAGGTTC TTTCCGTATC GGAGACGGGA GAGGTGATGC CGCAGAAATC GACCTTCTTT TACCCGAAAC TGATGACCGG TATGCTTTTT AACCCGCTTG ACTGA
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Protein sequence | MPEIIPFNGI LYSPELLKSA SELICPPYDV ISAAFQQRLY GSSPYNAIRL ELPLEADPYS AAAERLAEWL QGGELQNDSV PAIYPYFQTF EDSDGVSHTR CGFFAAMRLY DFSEKKVLPH EKTLSGPKAD RLNLFRKTKT NISGIFGLYA DESKTADCLM KAFTESHEPI VDAHFEGVSN RLWRITDPEI VGQFQQSLQD RAVYIADGHH RYDTGVNYRN ERAAANPSHT GQEPYNFILT YLANIHDEGL LIFPIHRLVH SLEGFDAALL KSRLAEFFTV TELHDRAALK AFLDGEPSSY AYGVVTSGMV LGICLKTDPK PLLDPARPEA LQRLGLVLLH DLILFRLLGI SQEAMAKQSN LTYVKDDREV FDAIDSGKVQ VGFVVKPTTV EQVLSVSETG EVMPQKSTFF YPKLMTGMLF NPLD
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