Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0030 |
Symbol | |
ID | 6462767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 28762 |
End bp | 30237 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642726332 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_002017004 |
Protein GI | 194335210 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATT CTGACCAGAC ACGGGTGCAA AGTGTCAATC TGCCTCCTGA TAAGGTGATG CATAAACTGG TTTCACTGGC CAAACGTCGA GGGTTTATTT TCCCGTCATC GGAAATCTAT GAGGGACTCT CCTCATGCTT CGACTATGGG CCACTGGGCA GCGAGATGAA AAGAAACATC AAGGAACTCT GGTGGAACTC AATGACCCGT CGCCACCAGA ATATTGTAGG GCTTGATGCA TCGATCATGA TGAACCCGAG GGTATGGGAG GCTTCAGGTC ATGTAGCAAG CTTCAACGAT CCGATGATTG ACGACAAAAC CACCAAAAGG CGCTACCGTG CTGACCATCT GATCGAAAAC CATATTGAGA AATTGCGACG GGACGGCAAG GAGGAAGAGC TCCTGAGGGT ACAAAGCGCA TATGAAGCCG TCGCCGGGGC AGAGGACTCG AACCGTGCAC TCTACGATAT TATCATTGCC GAAGGGATCA AGGCACAGGA CACCGGCTCG GGTGACTGGA CAGAGGTACG CCAGTTCAAT CTGATGTTCC AGTGTAATAT GGGCGCTGTT GCCGATAAAT CAAATATTGT CTACCTGCGG CCCGAAACAG CCCAGGGGAT TTTCGTGAAC TTCCATAACG TTCGCGAATC TTCACGCATG AAGGTACCGT TCGGCATAGC CCAGATCGGC AAAGCCTTCC GAAACGAGAT TGTGAAAGGA AACTTCATCT TCCGCATGGT AGAGTTTGAG CAGATGGAGA TGCAGTACTT CGTCAAACCC GGTACCCAGG CGGAAGCCTT TGAGGCATGG AGAGAAGAGC GGTTTGCCTG GTATACCAGC GCCCTTGGCC TCAGAAAGGA GAAACTGCAC TGGTACAAAC ATGACAAGCT GGCCCATTAT GCCGACCTTG CCTACGACAT CAAGTTCGAG TTCCCCTTCG GTATTGAAGA GATTGAGGGG ATTCACTCCA GAACCGATTT TGATCTGAAA CAGCATCAGG AGTATTCCGG CAAAAATATG GAGTATATCG ACCAGCTCAC CAATGAGCGC TACCTCCCCT ATGTGGTGGA AACCTCTGCC GGATGCGATC GACTCTTCCT GGCGCTGCTT GCAGATGCCT ACACAGAAGA TACCGTTGAT GGCGATGAAC GTGTTGTGCT GAAACTCTCA CCGAAAGTCG CTCCCATCAA AGCAGCCGTA CTGCCGCTGA TGAAAAAGTG CGGAATGGGA GAGATGGCCT CACTGCTGAG AGAAGAACTT TCAGCGGCAC ACCTTGTCCA ATATGATGAT GCAGGCTCTA TCGGCAAACG CTACCGCCGC CAGGACGAGA TCGGCACACC CTTCTGTATC ACGGTTGATC ATCAGTCTCT GGAGGAAAAC AGCGTCACCG TACGTTACCG CGACACGGCA ACACAAGAGA GGATCGAAAT TTCGAGGGTA CGGGAATTTC TCGCCTCAAA ACTAATCACG CTTTAA
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Protein sequence | MSNSDQTRVQ SVNLPPDKVM HKLVSLAKRR GFIFPSSEIY EGLSSCFDYG PLGSEMKRNI KELWWNSMTR RHQNIVGLDA SIMMNPRVWE ASGHVASFND PMIDDKTTKR RYRADHLIEN HIEKLRRDGK EEELLRVQSA YEAVAGAEDS NRALYDIIIA EGIKAQDTGS GDWTEVRQFN LMFQCNMGAV ADKSNIVYLR PETAQGIFVN FHNVRESSRM KVPFGIAQIG KAFRNEIVKG NFIFRMVEFE QMEMQYFVKP GTQAEAFEAW REERFAWYTS ALGLRKEKLH WYKHDKLAHY ADLAYDIKFE FPFGIEEIEG IHSRTDFDLK QHQEYSGKNM EYIDQLTNER YLPYVVETSA GCDRLFLALL ADAYTEDTVD GDERVVLKLS PKVAPIKAAV LPLMKKCGMG EMASLLREEL SAAHLVQYDD AGSIGKRYRR QDEIGTPFCI TVDHQSLEEN SVTVRYRDTA TQERIEISRV REFLASKLIT L
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