| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0006 |
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| Symbol | |
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| ID | 6463462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 5681 |
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| End bp | 8116 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642726310 |
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| Product | DNA polymerase B region |
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| Protein accession | YP_002016982 |
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| Protein GI | 194335188 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATA ATCCTGTGTT TCCGCTCTCA ATTAAACAAG CAATCATGGA CAGCATAATC
AGTGATATCG TAACCAACGA TCTGCTCTTT GGTAAAGATA AAGAGGAGCG GATTGTTGGA
GCATACCAGC TTTCAGACAC CCATATTAGG CTATTCAACA GGGATGACAA TGGGGTCAGT
TATCATGATG AACCATTTTT TCCATTTTTC TTCCTTTCTG AAAACTCTTT ACTGGACGGA
TTTATACCTG AAGAAAACGA GAAATTCTGG CTCGTAACGC TCGCTGGAAC GAACTATTAC
AAGAATCTTG CGATTTTTCG GAATTGGAAG AATCATAGAC GCGCTATTGA TTTTATCAAC
AGAAAACGTC TTAACGACAC AACAGAGAAT CAGGATAAAA ACACACAATA CGATAATAAT
TCACTGCTCT ACAGTAAAGG TGATGCTGTC ACGCAATACT TTCTGCAAAG TGGAAAAACC
CTTTTCAAGG GTATGATATT TGACGACCTG TATCGAATGC AGCTTGATAT TGAGACCCAT
TATGATCCCA TGAAGAGGCA AAATAGTGGA ACAGCTCTTG ATGATGATGA GGTGATTATC
ATTTCTTTGA GTGATAGCAG GGGATGGGAA CAGGTTCTTC ATTCTAAAAA CAGGACGGAA
AAGGAGCTTC TTGAAGAGCT TGTTACCCTT ATTGTGAAAA TGGATCCTGA TGTAATTGAG
GGACACAATA TTTTCAGTTT TGATCTCTCC TATCTGCAGC GAAGATGTGA TCGATATGGT
ATTCCTTTTG CCATTGGACG TAATGGGTTG TTAGCAAAAA CATATCCAGC ATCGATTCGT
TTTGCGGAAC GGAGCATTGA TTATCCCTTT TTTGATATAC CGGGACGCCA TGTCATCGAC
ACCCTTTTTC TGGTACAAAG CTATGATGTA TCACGGCGCT CAATGCAGAG TTATGGACTA
AAAGCAGTTG CAAAACATTT TGGTTTTGCC TCAAAAGAGC GTACCTACAT CGAATACAAG
GATATCGCCT CTCTTTGGCA AAATAATCAT GAGAAGCTTC TTGCCTATGC CCTGGATGAT
GTGCGCGAAA CAAGAGCGCT CTCATCACTT CTATCCGGCA GCAATTTCTA CCTTTCACAA
ATGTTGCCAT ATACGTATGC CATGACCTCT CGTATTGGAC AGGCTGCCAA AATTGAGGTA
CTCTTTGTAA GAGAGTATCT GCGTCGAAAG CAGTCAATAC CAAAACCCAC ATCTGGTCAA
CAGCACTCCG GTGGATATAC CGAGATATTT CTTAAAGGCA TTCTTGGTCC TATTGTCTAT
GCGGATGTTG AATCTCTCTA TCCTTCAATC ATGCTTTCAT ATGATATTTG CCCTAAAAGT
GATGAACTGA AAATATTTCC ATTGGTACTT AACGACCTTA AAGAGCTTCG ATTCAAAGCA
AAAGAGAGAG CACGGAATGA AAATATTCTC GGAAAATCCA CCCTTGCTGC CAATTTTGAT
GCCATGCAAA GTTCTTTCAA AATCCTGATC AATGCCATGT ACGGTTACCT TGGATTCAGT
GGAGGTATTT TCAACGATTT TTATGAGGCC GACAAGGTAA CAACAACGGG ACAGGCTCTT
GCAAAAAAAA TGATCATGGA ATTTGAAGCA AGAGGATGCA AGATCATTGA GGTTGATACG
GATGGTATTC TGTTTATACC ACCTCCGGAC GTGCAGAGCG AAATGGCTGA ACGAGAACTG
GTCAGTGAAG TCTCATCTCT TATGCCGTCT GGTATCAATA TCGGCTTTGA CGGGAGATTC
AAAAAAATGA TTTCCTATAT GAAAAAAAAT TACGCCCTTC TTGGATATGA TAATGTGATG
AAACTGAAAG GTTCTTCACT TACCAGCAGA AGTGGTGAGA AATTTGGAAG GGATTTTGTT
AGAAGAGGAT TTGAAACCCT CTTAACCGAG GATATCAATG GACTGCATAA TCTTTTTACC
GAATACAGAA ACAAGATTTT AAATCATGAA CTGGATATTT CTGATTTTTC AAGAACAGAA
AGCCTGAAAA ATTCACTCGA ACAATATCTT GAAGATGTTA AATCAGGTAA AAGATCAAAG
GCAATAACCT ATGAAATCGT CATAAAGGCA GGACTGAACA TAACAAAAGG GGAGAGAATA
ACTTTCTATA TAGCAGGAAC GGGCGCAGGA TCATCTGCGT ACGATAAAGG AAAGCTTGCG
TCTGAATGGA AAAGAGAAAA ACCGGATGAA AATACACACT TTTACCTCAA GCGTCTGGAT
GAGCATTGTC AAAAATTTCT TCCCTTTTTT AAACCCCAGG ATTATAGTAT GATTTTTTCT
GATGATACAC TGTTTTCTTT TTCTGCAGAT GGTATTGAAC TTCAAAGGGA GATACGACAT
ACGGAGACAG ATCCGTTCGG TGGAGAATTG ACTTGA
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| Protein sequence | MKHNPVFPLS IKQAIMDSII SDIVTNDLLF GKDKEERIVG AYQLSDTHIR LFNRDDNGVS
YHDEPFFPFF FLSENSLLDG FIPEENEKFW LVTLAGTNYY KNLAIFRNWK NHRRAIDFIN
RKRLNDTTEN QDKNTQYDNN SLLYSKGDAV TQYFLQSGKT LFKGMIFDDL YRMQLDIETH
YDPMKRQNSG TALDDDEVII ISLSDSRGWE QVLHSKNRTE KELLEELVTL IVKMDPDVIE
GHNIFSFDLS YLQRRCDRYG IPFAIGRNGL LAKTYPASIR FAERSIDYPF FDIPGRHVID
TLFLVQSYDV SRRSMQSYGL KAVAKHFGFA SKERTYIEYK DIASLWQNNH EKLLAYALDD
VRETRALSSL LSGSNFYLSQ MLPYTYAMTS RIGQAAKIEV LFVREYLRRK QSIPKPTSGQ
QHSGGYTEIF LKGILGPIVY ADVESLYPSI MLSYDICPKS DELKIFPLVL NDLKELRFKA
KERARNENIL GKSTLAANFD AMQSSFKILI NAMYGYLGFS GGIFNDFYEA DKVTTTGQAL
AKKMIMEFEA RGCKIIEVDT DGILFIPPPD VQSEMAEREL VSEVSSLMPS GINIGFDGRF
KKMISYMKKN YALLGYDNVM KLKGSSLTSR SGEKFGRDFV RRGFETLLTE DINGLHNLFT
EYRNKILNHE LDISDFSRTE SLKNSLEQYL EDVKSGKRSK AITYEIVIKA GLNITKGERI
TFYIAGTGAG SSAYDKGKLA SEWKREKPDE NTHFYLKRLD EHCQKFLPFF KPQDYSMIFS
DDTLFSFSAD GIELQREIRH TETDPFGGEL T
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