Gene Pnuc_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2058 
Symbol 
ID5052237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2125656 
End bp2126240 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content44% 
IMG OID640472232 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_001156833 
Protein GI145590236 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAA CCCTCGCCAA GCTCGTTAAA GAAATTCGTT CCTGTAGTTT ATGCGCTGAT 
CATCTGCCTT TAGGCCCCAG ACCCATTATT CAGGTTGGTA GTTCAGCGAA GATTCTTATT 
GTTGGCCAAG CCCCTGGTAG CCGAGTTCAT GAAACAGGAA TTCCATTTAA TGATCCTAGT 
GGCGATAGAT TAAGAGAATG GATGGGCATT GATAAAGAAG TGTTTTATGA CGAAAAGAAG 
ATTGCTTTAG TTCCCATGGG CTTTTGTTTT CCCGGAACGG GCAAGTCAGG CGATCTGCCG 
CCCAGGCCAG AATGTGCGGA CACATGGCGA GTCAAACTAT TAGAGCAATT ACCCAATATC 
AAGCTAACCA TCATTGTTGG GCAATATGCT CAAGCATGGC ATTTAGACAA AGGCAATAAA 
GACAATTTGA CTGAAACAGT TATGGCATGG AAGAGCTATT GGCCCAAGGC AATTCCTTTG 
CCACATCCAA GCCCCAGAAA CAATATTTGG CTAAAGAATA ATCCTTGGTT TGAGGAAGAG 
GTTTTACCCT CGCTCAGAAG GAAAGTGAAA GCTGTATTGA AGTAG
 
Protein sequence
MSQTLAKLVK EIRSCSLCAD HLPLGPRPII QVGSSAKILI VGQAPGSRVH ETGIPFNDPS 
GDRLREWMGI DKEVFYDEKK IALVPMGFCF PGTGKSGDLP PRPECADTWR VKLLEQLPNI 
KLTIIVGQYA QAWHLDKGNK DNLTETVMAW KSYWPKAIPL PHPSPRNNIW LKNNPWFEEE 
VLPSLRRKVK AVLK