Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_2034 |
Symbol | |
ID | 5052807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 2104253 |
End bp | 2105581 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640472208 |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_001156809 |
Protein GI | 145590212 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.636554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCCA CCTTGAAGAA GCCCCCAATT TATAAAGTCC TTTATTTTCA AGTACTTACG GCTGTTGTAA TTGGGGTTTT GTTAGGCCAT TTTTACCCTT CCTTGGGCGT AGATATGAAG CCTTTCGGGG ATGCCTTTAT TAAGGGCATC AAGATGTTAA TTGCCCCGAT CATTTTTTGT ACGGTTGTTC TTGGCATTGC CGGCATGGAA GACATGAAAA AGGTTGGAAA AACAGGCGGC CTTGCGCTTT TGTACTTTGA GATTGTCAGC ACAATTGCAT TAATGGTCGG ATTGGTTGTT GTGAATGTGT TGCAGCCTGG TGCGGGAATG AATATTGATC CAGCAAGCTT AGATACCAAA GGTATTGCCG CTTACACTGG CCCAGGAAAA ATGGGGACTA CCACTGAGTT CCTACTCAAC ATTATTCCAA GCAGTGCAGT CGATGCATTT GCTAAAGGTG AAATCTTACA AGTTCTCTTC ATTGCAATAT TGTTCGGTTT CGCATTACAT AAGTTCGGTG GTCGCGGAAC AATGGTGTTT GATTTAATTG AAAAAACATC CCATGTTCTT TTTGACATGA TTGCCATCAT CATGAAATTT GCGCCAATCG GCGCTTTTGG TGCAATGGCA TTTACGATTG GAAAATATGG CATAGGCTCA TTATTCTCAT TGGGTAAATT AATGGGCTCG TTTTATTTAA CTTGCTTGCT CTTCGTATTT ATTGTTCTTG GGATCATCGC GCGACTCAAT GGGTTTAATA TTTTTAAATT CGTGCGCTAC ATTAAGGAAG AGCTTTTAAT TGTGCTGGGC ACCTCTTCTT CCGAGTCAGT TTTGCCACGC ATGATGGAAA AGATGGAGCT TTTAGGTGCT AAGAAAGCCT GCGTTGGCTT GGTGATTCCA ACTGGCTATT CATTTAATCT GGACGGCACT TCGATTTATT TAACAATGGC TGCAGTATTT ATTGCGCAAG CTACAAATAC GCCGATGACC CTCCTACAAG AAGTTACTCT CTTGGCAGTG TTATTGCTTA CCTCTAAGGG AGCCGCCGGT GTAACTGGTA GTGGATTTAT TGTGTTGGCA GCCACTCTTT CAGCGGTAGG AGACGTGCCA GTAGCAGGCT TGGCAATCAT CTTAGGCATT GATCGCTTTA TGTCAGAGGC GCGTGCATTG ACTAACTTGG TCGGTAACGG AGTAGCTACT ATTGTGGTTG CTAAGTGGAC AGGTGAATTA GACCAAAAGC AATTAACTCG CGCATTAAAT CGGGATGACT GGATTGAGGC TCAAGAGCCA GAAATGATCT TGGATCATCA ACAAGACAAA ATGCGCTGA
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Protein sequence | MTATLKKPPI YKVLYFQVLT AVVIGVLLGH FYPSLGVDMK PFGDAFIKGI KMLIAPIIFC TVVLGIAGME DMKKVGKTGG LALLYFEIVS TIALMVGLVV VNVLQPGAGM NIDPASLDTK GIAAYTGPGK MGTTTEFLLN IIPSSAVDAF AKGEILQVLF IAILFGFALH KFGGRGTMVF DLIEKTSHVL FDMIAIIMKF APIGAFGAMA FTIGKYGIGS LFSLGKLMGS FYLTCLLFVF IVLGIIARLN GFNIFKFVRY IKEELLIVLG TSSSESVLPR MMEKMELLGA KKACVGLVIP TGYSFNLDGT SIYLTMAAVF IAQATNTPMT LLQEVTLLAV LLLTSKGAAG VTGSGFIVLA ATLSAVGDVP VAGLAIILGI DRFMSEARAL TNLVGNGVAT IVVAKWTGEL DQKQLTRALN RDDWIEAQEP EMILDHQQDK MR
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