| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2006 |
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| Symbol | |
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| ID | 5053499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2078959 |
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| End bp | 2079813 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640472180 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001156781 |
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| Protein GI | 145590184 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATGGTG CTGGCAATGA TTTCATTGTG CTCAATGGCA TCGATCAAGA CCTTAGTGAA
ATTACACGTG AGCAATGGCA AGCCTTAGCA CATCGCCAAT TTGGGATTGG TGCAGATCAA
ATCTTATTAG TTGAAAAAGC AACTCGCCCT GATGCTGATT TTCGCTATCG TATTTTTAAT
GCTGATGGCG GGGAAGTAGA GCAATGTGGT AATGGCTCGC GTTGTTTTGT CCGTTTCGTC
TTGGATCAAG GCTTGTCATC TAAAAATCCA TTACGCGTTG AAGTAGCGCA TACCGTTCTC
ACCCTCAAAT CTCATCCAGA TGGTCAGGTA GAAGTTGATA TGGGTGCGCC GATTTTTGAT
CACAACCTTA TTCCATTTAA TGCAAATGGT TTAGCCAGCA TGCAAGAGTT TCATGAAATG
CTTTATGCAC TTCCAATAGA TCTGCCAGCA ACTCATGACA GCCTGGTTGG CGTTCTCTCC
ATGGGCAATC CTCATGCAGT CCAGGTAGTT GGAGATGTAG ATAGCGCGCC CGTCTTAGAA
GAGGGGTCTG CGATTGAAAG ACATCCAGCG TTTCCTAACA AGGTGAATGT AGGCTACTTG
CAAGTGCTCA ATCGCAATGA AATCAAGTTG CGTGTTTATG AGCGAGGCGC AGGAGAAACG
CTAGCGTGCG GCACAGGCGC TTGTGCAGGC GTTGTTTCAG GAATCCGCAG AGGCCTATTA
GATTCGCCAG TGAAGGTGCA TACCCGTGGT GGTGATCTCC AGATCGTTTG GGGCGGAGTT
ATAGATGAAG TGGCACATCC CGTCATCATG ACTGGTCCAG CCACTACAGT CTTCGAAGGC
GAAACTGAAA TCTAA
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| Protein sequence | MHGAGNDFIV LNGIDQDLSE ITREQWQALA HRQFGIGADQ ILLVEKATRP DADFRYRIFN
ADGGEVEQCG NGSRCFVRFV LDQGLSSKNP LRVEVAHTVL TLKSHPDGQV EVDMGAPIFD
HNLIPFNANG LASMQEFHEM LYALPIDLPA THDSLVGVLS MGNPHAVQVV GDVDSAPVLE
EGSAIERHPA FPNKVNVGYL QVLNRNEIKL RVYERGAGET LACGTGACAG VVSGIRRGLL
DSPVKVHTRG GDLQIVWGGV IDEVAHPVIM TGPATTVFEG ETEI
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