| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1980 |
|---|
| Symbol | |
|---|
| ID | 5053480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 2050185 |
|---|
| End bp | 2051249 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640472155 |
|---|
| Product | methionine synthase |
|---|
| Protein accession | YP_001156756 |
|---|
| Protein GI | 145590159 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTTA ATGGTTTATC CCAGCCCTAC ACCCGCGGTC AAGCGCTTCC TGAGCTCTTA
AAGCAGCGCA TCCTCATATT GGATGGCGCT ATGGGGACCA TGATTCAGCA ATATAAATTA
GGTGAGGCCG ATTACCGCGG CTTACCCACC AATACTCGTT TTGCAGGCCA TCCTGGCGAT
ATCAAAGGCA ATAACGAATT ATTAGTTTTA ACTCAGCCAC AGATCATTAG CAAAATTCAC
GAGCAATATT TAGATGCTGG TGCTGACATT ATTGAAACCA ATACTTTTGG CGCCACATCT
GTTGCTCAAG AGGATTACAA AATGGCCGGC TTAGCACGTG AGATGAATGA AGTCTCTGCA
AAATTAGCCC GTGCTGCTTG TGAAAAATAC AGCACTCCTG ACAAGCCACG CTTTGCAGCG
GGCGCAATTG GGCCCACACC AAAGACCGCC AGTATTTCCC CTGATGTAAA TGATCCAGGC
GCTCGTAATG TTACGTTTGA TGCTTTGCGT GCCTCTTACC GCGAGCAGAT TGAAGGCTTA
TTTGCAGGTG GTGTTGACTT ATTTTTAGTG GAAACTATTT TTGATACGCT CAATGCTAAA
GCGGCATTGT TTGCGCTCGA TGAATTTTTT GAAGAAACCG GAGAGCGTTT ACCAGTGATG
ATTTCCGGAA CAGTAACCGA TGCTTCTGGA CGAATTCTTT CTGGTCAAAC GGTAGAAGCG
TTTTGGAATA GTTTGCGTCA CATTAAACCC CTCACCTTTG GTTTAAATTG TGCGCTGGGT
GCCGCTCTGA TGCGTCCATA TATTGCAGAG TTGTCCCGAA TTTGCGATGC CGCAGTTTCT
TGCTATCCCA ATGCGGGCTT GCCTAATCCA ATGAGTGATA CTGGGTTTGA TGAGACTCCT
GATATCACCT CTAGTCTGGT CGATGGTTTT GCTAAAGACG GCTTAGTCAA TTTAGTTGGC
GGTTGCTGCG GCACTACTCC GGATCACATT CGTGCAATTG CTAATGCAGT TGCTAAGCGT
AAGCCCCGTG CCTTCTATCG TGAAAATACA GAGGAGTCTG TATGA
|
|---|
| Protein sequence | MQFNGLSQPY TRGQALPELL KQRILILDGA MGTMIQQYKL GEADYRGLPT NTRFAGHPGD
IKGNNELLVL TQPQIISKIH EQYLDAGADI IETNTFGATS VAQEDYKMAG LAREMNEVSA
KLARAACEKY STPDKPRFAA GAIGPTPKTA SISPDVNDPG ARNVTFDALR ASYREQIEGL
FAGGVDLFLV ETIFDTLNAK AALFALDEFF EETGERLPVM ISGTVTDASG RILSGQTVEA
FWNSLRHIKP LTFGLNCALG AALMRPYIAE LSRICDAAVS CYPNAGLPNP MSDTGFDETP
DITSSLVDGF AKDGLVNLVG GCCGTTPDHI RAIANAVAKR KPRAFYRENT EESV
|
|---|
| |