Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1974 |
Symbol | |
ID | 5053973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 2043247 |
End bp | 2044023 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640472149 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001156750 |
Protein GI | 145590153 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCAAA AAGGAGTTGA TCAGTTTGCC AGCAAACGGG TTTGGATTAT TGGCGCCTCC AGCGGTATTG GTGAAGCTTG CGCTAAAGCC CTCATCCAAG CAGGTGCAAA GGTAGCTCTT TCGAGCAGAC GAGTAGAACG ATTAAATGTC ATTGCTCAAT CCGCCTCCAC AAATCAGGCT TTAGTTTTTC CCTTAGACGT CACCCAAACA GATCAATTAA AAGCAGCTTA CGATTGCATT CTGAATGGCT GGGGTGGAAT TGATATTTTG CTATTTGTAT CGGGCATGTA TGTTCCTCTG CGTGCTGATC AATTTGATTT CCAGATAGCC GAGCAAACGA TTGATGCCAA TTTACTTGGT CCGATGCGCG CAGTATCTCT TGTACTTCCT GAAATGCTCA AAGCACATAG TGGGCATATC GCCATCGTTG GCAGTGTTGC AGGCTATAGC GGACTGCCTA AAGCCCTTGC CTATGGGCCA AGTAAAGCCG CCATCATTAA TTTCTGTGAG AATTTGTATT ACGACTTACT GCCAGAAGGC GTAAGCGTTC ATATGATTTC TCCTGGATTT GTGGCTACCG AGGCAACCGC TCAAAATGAC TTTGAAATGC CTGCCTTAAT AAGTGCCGAA GAAGCTGCAA ATGAAATACT GAAGGGGATA CAAGAAGGTG AATTTGATAT TCACTTCCCT AAACGATTTT CAAGATTCTT GAAGTTTCTC AGAATCCTGC CTTACCCAGT GTATTTTTGG ATTGTGCGCC GCTTTGTCAA AATCTAA
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Protein sequence | MRQKGVDQFA SKRVWIIGAS SGIGEACAKA LIQAGAKVAL SSRRVERLNV IAQSASTNQA LVFPLDVTQT DQLKAAYDCI LNGWGGIDIL LFVSGMYVPL RADQFDFQIA EQTIDANLLG PMRAVSLVLP EMLKAHSGHI AIVGSVAGYS GLPKALAYGP SKAAIINFCE NLYYDLLPEG VSVHMISPGF VATEATAQND FEMPALISAE EAANEILKGI QEGEFDIHFP KRFSRFLKFL RILPYPVYFW IVRRFVKI
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