Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1940 |
Symbol | |
ID | 5053708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 2015592 |
End bp | 2016749 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640472115 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_001156716 |
Protein GI | 145590119 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0684443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAT TTGGAAAAGT CACTAGGGCT TCGCTCTATT TAGTAGCAGC CTTTGGCGCT GCATTGGCAC ACGCATCTGA AAATATGCCG GGTGGCCCTG CTGTCAATCA GCTGAATTTC ACGGCTCCAG CAACCAAAAT CATGCAAGAA ATCCATTGGT TACATTGGAT GATGTTGGGG ATCTGTGCAT TGATTTTTAT CGGTGTTTTT GGGGTGATGT TCTATTCCAT TTTGAAGCAT CGCAAATCAC TCGGTCACAA GTCAGCCTCG TTTCATGAGA GCACTACTGT AGAAATTATC TGGACAGTAA TTCCTCTGCT CATCGTGATT GGAATGGCTT TGCCTGCGAC AAAAACAGTT GTGGCAATGA AAGATACAAC CAATTCAGAT ATCACCATTA AGACTACTGG TTATCAGTGG AAATGGGGTT ATGACTATAT TAAGGGTGAG GGCGAAGGCA TTAGCTTTTT GTCAACCTTA ACAACATCTC GTGAGGCGAT TAATAACTTA GCACCTAAAT CAAATACGTA TTTGATGGAA GTGGATAACG AATTGGTTGT ACCCGTAGGC AAAAAAATTC GCTTGATTAC TACTGCAAAC GACGTGATTC ACTCTTGGAC TATCCCAGCA TTTGGTGTGA AGCAAGATGC GATCCCAGGA TTCGTTCGCG ACACTTGGTT TAAGGCTGAA ACTATCGGTA CATTCCGCGG TCAGTGTTCT GAGCTATGTG GCGCAGAACA TGCTTTCATG CCTATCGTAG TTAAAGTGGT CTCACAGGAT GACTATACCG CTTGGGTTGC CGAGAAGAAG AAGGCAATGT CTGCTACTTC TGATGATCCT ACTAAGGTTT ACACACTGGA AGAGCAAAAA GAGCGTGGCG CAAAAGTATA TGCAGCTAAC TGCGCAGCTT GCCATCAGCC AAATGGTAAA GGCGCTGGTG CTTTCCCAGC ATTGGATGGC AGCAAAGTGG TGAATGGTCC TAAAGCAGGT CAGATCACTA TTTTGCTAAA CGGTAAAAAT GCAATGCCGA AGTGGGGTGG TGTTTTGTCT GATGCTGACA TTGCAGCAGT CATAACCTAT ACCCGCAACT CATGGGGTAA TAAAACGGGT GAAGTGATTC AGACTCAAGA AATTATTACC GCAAATGGCG GCAAGTAA
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Protein sequence | MNLFGKVTRA SLYLVAAFGA ALAHASENMP GGPAVNQLNF TAPATKIMQE IHWLHWMMLG ICALIFIGVF GVMFYSILKH RKSLGHKSAS FHESTTVEII WTVIPLLIVI GMALPATKTV VAMKDTTNSD ITIKTTGYQW KWGYDYIKGE GEGISFLSTL TTSREAINNL APKSNTYLME VDNELVVPVG KKIRLITTAN DVIHSWTIPA FGVKQDAIPG FVRDTWFKAE TIGTFRGQCS ELCGAEHAFM PIVVKVVSQD DYTAWVAEKK KAMSATSDDP TKVYTLEEQK ERGAKVYAAN CAACHQPNGK GAGAFPALDG SKVVNGPKAG QITILLNGKN AMPKWGGVLS DADIAAVITY TRNSWGNKTG EVIQTQEIIT ANGGK
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