Gene Pnuc_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1937 
Symbol 
ID5053832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2013005 
End bp2013202 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content39% 
IMG OID640472112 
Productputative transmembrane protein 
Protein accessionYP_001156713 
Protein GI145590116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0759563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGA AAAAAAGTAG TTTTATGCAA TCGATGAAAG CAGTGATGTG GGGCTTTCTA 
GGTGTGCGTA AAAAAGCAGG TTTGCAGGAA GATGTAGCTA CATTAAGTTT TGTTCACATT 
ATCATTGCAG GTGTAGTTGG TGCCCTGATT TTCATGGCTA TTCTGCTCTT GATAGTGAAA 
GCAGTTGTGT CCCATTGA
 
Protein sequence
MQKKKSSFMQ SMKAVMWGFL GVRKKAGLQE DVATLSFVHI IIAGVVGALI FMAILLLIVK 
AVVSH