| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1892 |
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| Symbol | |
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| ID | 5053268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1967417 |
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| End bp | 1969216 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472066 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001156668 |
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| Protein GI | 145590071 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00404218 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATGC GTAGCCATAC TTGCGGCCAA GTTACTGATT CTTTAATTGG TAAAGAGGTC
ACCCTCTCAG GATGGGTAAA TCGTCGTCGT GACCATGGCG GGGTTATCTT TATTGACTTG
CGTGACCGTG AAGGTTTTGT TCAAGTTGTT TGTGACCCAG ATCGCCCTGA AATGTTTGCG
CTCGCTGAGC AGGTTCGCAA TGAATTTTGT ATCCAGATCA AAGGACTTGT ACGTGCCCGT
CCAGCTGGAA CTGAAAATAA TGATTTAGTC AGCGGTAAAG TAGAAGTTCT TTGCCATGGC
CTAGTCATTC TCAATGCATC TATAACACCC CCATTCCAAA TTGATGATGA GAATTTGTCT
GAAACCACTC GACTTACTCA TCGCGTCTTA GACTTGCGTC GCCCCCAAAT GCAAAAGAAT
TTACGCTTGC GTTACAACGT GGCAATGGAA TGTCGTCGCT ATTTAGATGA TGCTGGCTTT
ATTGACATTG AAACCCCAAT GCTCACTAAG AGCACACCAG AAGGTGCGCG TGACTACTTG
GTACCATCAC GTGTACATGA TGGTCAGTTT TTTGCTTTGC CACAGTCTCC TCAGTTGTTT
AAGCAATTAC TCATGGTGGC AGGCTTTGAT CGTTACTACC AAATTACGAA GTGTTTCCGT
GACGAAGATT TACGCGCTGA TCGTCAGCCT GAATTTACTC AGATCGACTG TGAAACTGCC
TTTTTAAGCG AATTAGAGAT TCGTGAGTTG TTTGAAAACA TGATTCGTCA TATCTTCAAA
AAGACGATGA ACGTTGAATT GCCGAATCCT TTCCCAACCA TGCCTTATTC CGAAGGTATG
GCACGTTTTG GCTCCGATAA ACCAGACTTA CGCGTGAACT TTGAGTTCAC CGAATTAACG
GATTTGATGA AAGACGTTGA TTTCAAGGTG TTCTCAGGTG CAGCCAATCA AGACGGCGGC
CGTGTAGTAG GATTGTGTGT GCCTGGCGGT GCTGGAATTA GCCGTAGCGA AATCGATGAC
TACACTCAGT TTGTCAGCAT CTACGGAGCT AAAGGTTTAG CTTGGATCAA AGTGAACTCT
GTCACTGAAG GCCGTAATGG TTTGCAGTCA CCAATCGTGA AGAATTTACA CGATGCAGCT
ATCGAAGGTA TCTTAAAGCG TACTGGTGCA AAAGATGGCG ATATTATTTT CTTCGGCGCC
GATAAAGAAA AAGTAGTGAA TGATGCAATC GGTAATTTGC GTTTGCGTAT CGGTCACTCT
GCTTGGGGTA AAGAGCATGG CCTCTTTACT GAAGGTTGGA AGCCATTGTG GGTGGTTGAT
TTCCCCATGT TTGATTACGA TGAAGGCGAA GCCCGCTGGG TTGCCTGCCA TCATCCATTC
ACCAGCCCTA AAGATGAGCA CATGCAATAT TTAGAGTCTG ATCCTGGCAA GTGCTTAGCC
AAAGCCTATG ACATGGTCTT GAACGGGAGT GAAATCGGCG GCGGTTCTGT ACGTATTCAC
CAAGAGGTTG TTCAAAGTCA GGTATTCCGC GCCCTGAAGA TTGGCGCTGA AGAAGCCCAG
GCTAAGTTTG GTTTCTTGCT CGATGCACTC CAATATGGTG CGCCTCCTCA TGGCGGTATT
GCTTTTGGTT TGGATCGCAT TGTGACCATG ATGACCGGTG CCGAATCTAT TCGCGATGTG
ATTGCATTCC CTAAAACCCA ACGTGCACAA TGCTTGCTCA CTCAAGCTCC AAGCTCTGTT
GATGAGCGTC AATTGAAAGA GTTGCATATC CGTTTGCGCC AAGCTGCGCC GGCGGCTTAA
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| Protein sequence | MSMRSHTCGQ VTDSLIGKEV TLSGWVNRRR DHGGVIFIDL RDREGFVQVV CDPDRPEMFA
LAEQVRNEFC IQIKGLVRAR PAGTENNDLV SGKVEVLCHG LVILNASITP PFQIDDENLS
ETTRLTHRVL DLRRPQMQKN LRLRYNVAME CRRYLDDAGF IDIETPMLTK STPEGARDYL
VPSRVHDGQF FALPQSPQLF KQLLMVAGFD RYYQITKCFR DEDLRADRQP EFTQIDCETA
FLSELEIREL FENMIRHIFK KTMNVELPNP FPTMPYSEGM ARFGSDKPDL RVNFEFTELT
DLMKDVDFKV FSGAANQDGG RVVGLCVPGG AGISRSEIDD YTQFVSIYGA KGLAWIKVNS
VTEGRNGLQS PIVKNLHDAA IEGILKRTGA KDGDIIFFGA DKEKVVNDAI GNLRLRIGHS
AWGKEHGLFT EGWKPLWVVD FPMFDYDEGE ARWVACHHPF TSPKDEHMQY LESDPGKCLA
KAYDMVLNGS EIGGGSVRIH QEVVQSQVFR ALKIGAEEAQ AKFGFLLDAL QYGAPPHGGI
AFGLDRIVTM MTGAESIRDV IAFPKTQRAQ CLLTQAPSSV DERQLKELHI RLRQAAPAA
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