| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1859 |
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| Symbol | |
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| ID | 5052114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1932558 |
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| End bp | 1933904 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640472032 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001156635 |
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| Protein GI | 145590038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TCTATATCAA AACCTTTGGT TGCCAAATGA ACGAGTATGA CTCGGGCAAA
ATGGCGGACC TACTCCATGC CGATGAGGGC ATGGTCATGA CAGACACCCC TGAAGATGCG
GATGTTGTTT TACTAAACAC ATGCTCTATA CGCGAGAAAG CCGAAGATAA AGTGTTTTCT
GATCTTGGGC GCTTAAGAGA GCTCAAAAAA ACTAAACCTC ATATGTTAAT TGGCGTTGGT
GGATGCGTAG CTAGTCAAGA AGGCCGCCAA ATTGTTAGTC GTGCGCCTTA TGTAGACGTT
GTATTTGGCC CCCAAACCTT ACATCGTTTA AGCGATCTCA TTGCACAACG TCGAAAAACA
GGTCTCTCTC AAGTAGATAT CTCCTTTCCT GAGATTGAGA AGTTTGATCA CCTCCCAGCC
TCCCGTCAAA CGCGTGGCTC TGCTTACGTT TCCATCATGG AGGGCTGCTC TAAATACTGC
AGTTACTGTG TAGTGCCATA TACCCGCGGC GAGGAAGTTT CCAGGCCATT TGATGATGTG
TTAACCGAGG TTGCCGGTCT TGCCAGCAAA GGCGTAAAAG AAATCGTGCT GCTTGGACAA
AACGTCAATG CGTATCTTGG AAAAATGGGA GATGCCGAAG AGATTGCAGA CTTTGCTTTG
TTAATTGAAT ACATCGCAGA AATTCCCGGA GTAGAGCGGA TTCGTTTTAC AACCAGCCAT
CCTAAAGAAT TTACTCAACG CTTGATTGAT GTGTATGCCA AGGTTCCTAA GTTAGTAAGC
CATCTTCATC TACCAGTCCA ACATGGTTCT GACTCAATTC TGTCAGCCAT GAAGCGTGGC
TATACTGCTT TGGAATATAA AAGCATTATT CGGAAGATGC GTGCTGTACG TCCTGACCTT
ACGCTATCAA GTGATTTCAT TGTGGGCTTT CCGGGGGAGA CGGATGCCGA TTTTGAGAAG
TTATTAAAAA TGGTGCAAGA GCTCGATTTC GATAACAGCT TTTGCTTTAT CTTTAGCCCA
CGCCCAGGCA CGCCGGCGGC TAACTTAAGC GATGACACTC CCTACGAAGT GAAATTAAAG
CGTCTACAAA CTCTCTTGGC GTTAATTGAA GGGCAATCAA ATCAGATTAG CCAAAAAATG
TTGGGCAAGA CTGAAAGAGT CCTCATTGAA GGCTTAGCTA AAGACGGAGT TAACCTTCAA
GGTCGCGCTG AAAACAATCG AGTCATTCAT TTTTCCCCGC CAGATCAAAA TATCGACGGC
TTGATTGGAG AAATGGTAGA TATTCGCATT ACTGAGGTGC TTAATTACAC TCTCCGCGGT
GAATTGGTAG AGACTCATGT CATCTAA
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| Protein sequence | MKKLYIKTFG CQMNEYDSGK MADLLHADEG MVMTDTPEDA DVVLLNTCSI REKAEDKVFS
DLGRLRELKK TKPHMLIGVG GCVASQEGRQ IVSRAPYVDV VFGPQTLHRL SDLIAQRRKT
GLSQVDISFP EIEKFDHLPA SRQTRGSAYV SIMEGCSKYC SYCVVPYTRG EEVSRPFDDV
LTEVAGLASK GVKEIVLLGQ NVNAYLGKMG DAEEIADFAL LIEYIAEIPG VERIRFTTSH
PKEFTQRLID VYAKVPKLVS HLHLPVQHGS DSILSAMKRG YTALEYKSII RKMRAVRPDL
TLSSDFIVGF PGETDADFEK LLKMVQELDF DNSFCFIFSP RPGTPAANLS DDTPYEVKLK
RLQTLLALIE GQSNQISQKM LGKTERVLIE GLAKDGVNLQ GRAENNRVIH FSPPDQNIDG
LIGEMVDIRI TEVLNYTLRG ELVETHVI
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