Gene Pnuc_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1845 
Symbol 
ID5053172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1922198 
End bp1923610 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content39% 
IMG OID640472018 
Productphage integrase family protein 
Protein accessionYP_001156622 
Protein GI145590025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.283171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAAC GCAAAGCTAC AAGCAAAAGC ATCATAGACG GCGAGTTGCT GGTGGTATTG 
CGTGAAAGAA GTAGCGTGTA TCAGTGTCAC TACAAGATAG ATGGGAAGTG GCAGAGAACC 
AGTACAAAGC AAAGAGATAT TAAAAAAGCG CAAGAAGTAG CTAAAGACAT ATACAAAGAA 
GCGCACTGGA AAAAGAAAAA CCAAGTAGCA CCCATCACAC GCTACTTTAG AGATGTAGCT 
AAAACGGTTG TAAAGAGGCT ACAAGACGCT TTAGACAGCA AAGAGGGTAA AGCTGTGTAT 
AGGGACTACA TCACAGCTAT AAACCGCTAT CTGGTGCCTG CGTTAGGAAA ATACTATGTA 
GATAGCATTG ACTACAAAGC ATTTGCGCAT TTTGAAGAGG TGCGTAAAAA GAAGATGAAG 
GGTAAGGACG CAACCAAAAG TACCCAGCTA ACGCATAACG CGGCACTTAA TAAAGTATTT 
GATGAAGCTA TATACAGAGG CTATATGGTT GAATCAAACA GATTGGTGCT CAAAGCAAAA 
GGTAAAGCAA GTGAGAGGCG TGCGGAATTT AGCGTAGAAG AAGTTAAAGC TATGCGTAGT 
AATTTTGATG CGTGGATTGA AAAAGGTAGG GTTGATACAA GAGAGTTAAG GGCTCTACTA 
AAAGAGTATG TAGAAATATT ACTTGATACA GGCGCAAGGG CTGGTAAAGA AGTATTGGAC 
TTGAAGTGGG CGCACATAGA AATAACAGAA GACAAGGAAA TTATTAATAC GGGTATTAAG 
GTGTTGCCTG ATGATGTTGA TGACAGGGGT TATGAACAGC AAGACTGGAG GCGCAATCGC 
ACAGCCTATA TAAAAATACT AACTGGTAAA ACGTCAAAAA AGAATGGTGT ATTAGAGGGT 
AGGACAGCTA TTGGTAATTT ATACACAGTA CAGGCATTGG ATAGAATAGC GCAACGCAAC 
TATGGGATGA CTGCGTTGGA GGTAATACAG AAGTATCCAC AAGACGCTGT ATTTAGATAT 
AAAGAATATC AAAGTAAGCG CAACAACAAA CTCAATACAC CTGTTAAGTT GCTACCCCCA 
ACAGATTTAG TAAAATTGTT TAGAGTGTAT TTGGAAGAAC ATAACTTATA CATTGACCCT 
GTTACTGGTA AAGGTCGTCC TCCTTACTGC TTAAGACACA CCTACGCAAC AATCAAGCTA 
CTACACGACA AAATACCGCC AAACATATTA AAAAAACAAA TGGGAACTTC AATACAGATG 
TTAGAAAAAT ATTACGATCA CATCACTACT AAAAAAGCTG CCAATCAACT GCGTGATGAA 
GAAAGTAGAG TTTTGATTCA GGCTGGTGGC AAGGTGAATG AAAAGTATGA GTACAGAGAG 
GTAAAGCGTA GTAAGAATAA AAAAGTATCT TAG
 
Protein sequence
MVERKATSKS IIDGELLVVL RERSSVYQCH YKIDGKWQRT STKQRDIKKA QEVAKDIYKE 
AHWKKKNQVA PITRYFRDVA KTVVKRLQDA LDSKEGKAVY RDYITAINRY LVPALGKYYV 
DSIDYKAFAH FEEVRKKKMK GKDATKSTQL THNAALNKVF DEAIYRGYMV ESNRLVLKAK 
GKASERRAEF SVEEVKAMRS NFDAWIEKGR VDTRELRALL KEYVEILLDT GARAGKEVLD 
LKWAHIEITE DKEIINTGIK VLPDDVDDRG YEQQDWRRNR TAYIKILTGK TSKKNGVLEG 
RTAIGNLYTV QALDRIAQRN YGMTALEVIQ KYPQDAVFRY KEYQSKRNNK LNTPVKLLPP 
TDLVKLFRVY LEEHNLYIDP VTGKGRPPYC LRHTYATIKL LHDKIPPNIL KKQMGTSIQM 
LEKYYDHITT KKAANQLRDE ESRVLIQAGG KVNEKYEYRE VKRSKNKKVS