| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1823 |
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| Symbol | |
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| ID | 5052669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1902179 |
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| End bp | 1903867 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471996 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_001156600 |
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| Protein GI | 145590003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAG ATAAAAAACC CTCCTTTTTG TGGCGTTTAG TCACTGCCCA ACTAATATTG
ACCCTGACTT GCTCAGGTCT TTCCCCTACT TATGCAGCCT CAGTAACAGG CGATGTTTCT
GTTGAGGGAA ATTCAGCAGC TATACAGAAT ATTGGCCGTG CTATGCAGTC TCCAGACGCG
CGACCCACTA ATGCGCCAAC TAGAACTACC TATACTCAGT CTAATATTGT GTTGCCAGAT
ATGGGTGATC CCGGCGGAGA TTCATTAAGT CGCATAGATG AGCGTAAGTA TGGTGAGTTA
ATCATGCGTC AAATTAGGCC GGATCCTGAT TATTCAAATG ATTTACCGAT CTATGATTAC
CTTAATCAAA TGGAGCGACG TTTATTACAG GCTGCAAAGA AAGCTCAGCT GGGTGGTGCT
AATGAGCAGG GTAGTGGTGC CTACAATTTT GAATTATTTG CGGTAAAAGA TAGCAGCATT
AATGCATTCG CATTGCCGGG TGGATTCATT GGTTTTCATA CAGGCTTGAT TGTCAATGCA
GAATCAGACT CTGAAGTAGC TTCCGTAATG GGTCATGAAA CTGGCCACGT ATTGCAGCGT
CATTTAGCCA GGCAAATGGA TAAGCAAGCT ACCAACACAA TGATTGCTTT AGCTGGAGTA
CTGCTTGGTG CATTAGCTGC ATCACGCAAT CCTCAGGCCG CGGCTGGCCT TATGCAGGGC
GGACAAGCGG TCGCCATTAA TAACCAGCTG TCATATTCTA GAGATGCTGA GCGTGAGGCG
GATCGTATTG GTTTTCAGAT CTTGGATGCC AGTGGTTATG ACGTTAATGG CGCCCCAGGA
TTTTTTCAGC GCTTACAAAA GGCCACTGGA ATTATGGACA AGGGAGTACC ATCGTATGTT
CGTACTCACC CTTTAACAAT TGACCGTATT GCGGATATGC AAGATCGTGC ACGTACTGTG
CCTCCGCGCA ATGTACCCAC ATCAGCTGAG TTTTACTTTA TTAAGGCTCG GGCTCGTATG
GAACAAGCGG GAACCTCTAG TGGGCTCTAC GACTTAAAAA ATACTTTTGA CAGTTTAAGC
AAGCAGCCAC AAGCTGGAAA ACAAATGGAA GGCTTTTATG GTTTGGCCCT AATTGCTCAA
AGACAGGGCA AGTGGGATCA GGCAGAGGCT GATTTGCAAC AAGCACGTAA TTTAGCGCAA
AAATCGAGCG CCCCAGGATC GCCTATTCAG CGCCAAAGCC TTTCTTTGGA TATCACCGCT
TCAGAGTTGG CGCTAGCTAG GGGTAAAAAT GAAGAGGCAC TACAAATTGC GCAGACTGCT
TTACGTGCAT ACCCTCAGTC TTATGCGGCT GGCGCAGCCA TGATTAATGC TGAATTAAAG
TTGGGCAGAA CGAACGATGC TATTGCTTGG TTAAAGGCGC GTACAAAATC ACAGCCTAAT
GAGATTGTTT GGTGGGGAAT GCTGTCCAAT GCTTATGAGA AGGCTAACAA TATCCCTATG
CGTCACTACG CTCTGGGAGA AAAATATGCG CTTGAAGGTG CATGGCCATC TGCCATTGAG
CAATTGAGGA TTGCCCGTGC GGCTGGTGGC TCAGATTTTT ATCAGGGTTC TAGTATTGAT
GCTCGTTTGC GCGAAATGCA ACGTCAGTAT CAAGACGAGC TCAAAGAAAA CAAACAATTA
CCTAGTTAG
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| Protein sequence | MKLDKKPSFL WRLVTAQLIL TLTCSGLSPT YAASVTGDVS VEGNSAAIQN IGRAMQSPDA
RPTNAPTRTT YTQSNIVLPD MGDPGGDSLS RIDERKYGEL IMRQIRPDPD YSNDLPIYDY
LNQMERRLLQ AAKKAQLGGA NEQGSGAYNF ELFAVKDSSI NAFALPGGFI GFHTGLIVNA
ESDSEVASVM GHETGHVLQR HLARQMDKQA TNTMIALAGV LLGALAASRN PQAAAGLMQG
GQAVAINNQL SYSRDAEREA DRIGFQILDA SGYDVNGAPG FFQRLQKATG IMDKGVPSYV
RTHPLTIDRI ADMQDRARTV PPRNVPTSAE FYFIKARARM EQAGTSSGLY DLKNTFDSLS
KQPQAGKQME GFYGLALIAQ RQGKWDQAEA DLQQARNLAQ KSSAPGSPIQ RQSLSLDITA
SELALARGKN EEALQIAQTA LRAYPQSYAA GAAMINAELK LGRTNDAIAW LKARTKSQPN
EIVWWGMLSN AYEKANNIPM RHYALGEKYA LEGAWPSAIE QLRIARAAGG SDFYQGSSID
ARLREMQRQY QDELKENKQL PS
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